Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 ACTBP8-201ENST00000403258 1108 ntBASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 AC078819.1-201ENST00000547454 765 ntBASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 AC012085.1-201ENST00000548270 765 ntBASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 AC244093.1-201ENST00000610837 814 ntBASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 AC138951.2-201ENST00000623455 1161 ntBASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 TMBIM7P-203ENST00000641617 1718 ntBASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP6V0A1Q93050 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.14■□□□□ 0.34
ATP6V0A1Q93050 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.14■□□□□ 0.34
ATP6V0A1Q93050 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 AC006001.1-201ENST00000325130 474 ntBASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 GHSR-202ENST00000427970 912 ntBASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 AC091271.1-201ENST00000611877 1162 ntBASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 AC132938.4-201ENST00000623835 848 ntBASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
ATP6V0A1Q93050 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 AL139094.1-201ENST00000405549 1188 ntBASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 AC099548.2-209ENST00000480264 625 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms