Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 TNRC18P3-201ENST00000441896 2691 ntBASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 RPL5P21-201ENST00000404620 815 ntBASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 XBP1P1-201ENST00000436573 652 ntBASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 NEU3-207ENST00000534628 746 ntTSL 2 BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP7Q8WUX9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 RNA5SP359-201ENST00000364838 113 ntBASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 COX20P1-201ENST00000366529 357 ntBASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
CHMP7Q8WUX9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 HLA-DQB1-202ENST00000399079 1501 ntBASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 FAM86B3P-203ENST00000523992 854 ntBASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 MRPL37P1-201ENST00000592451 1337 ntBASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP7Q8WUX9 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 ALG3P1-201ENST00000508806 1114 ntBASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
CHMP7Q8WUX9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms