Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 AC005252.2-201ENST00000624630 1141 ntBASIC16.26■□□□□ 0.19
UBA3Q8TBC4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.26■□□□□ 0.19
UBA3Q8TBC4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBA3Q8TBC4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 REXO1L2P-201ENST00000425429 2069 ntBASIC16.25■□□□□ 0.19
UBA3Q8TBC4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 TCAF2P1-201ENST00000291129 2421 ntBASIC16.25■□□□□ 0.19
UBA3Q8TBC4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 AC098614.1-201ENST00000368528 745 ntBASIC16.25■□□□□ 0.19
UBA3Q8TBC4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 AC104457.1-201ENST00000401024 814 ntBASIC16.25■□□□□ 0.19
UBA3Q8TBC4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 INE1-201ENST00000456273 945 ntBASIC16.25■□□□□ 0.19
UBA3Q8TBC4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 CLUHP6-201ENST00000580789 941 ntBASIC16.25■□□□□ 0.19
UBA3Q8TBC4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 AL158070.2-201ENST00000623713 1621 ntBASIC16.25■□□□□ 0.19
UBA3Q8TBC4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 MROH4P-201ENST00000431302 1578 ntBASIC16.25■□□□□ 0.19
UBA3Q8TBC4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 AGAP7P-201ENST00000582299 2062 ntBASIC16.25■□□□□ 0.19
UBA3Q8TBC4 AGAP14-201ENST00000624701 2060 ntBASIC16.25■□□□□ 0.19
UBA3Q8TBC4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.25■□□□□ 0.19
UBA3Q8TBC4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBA3Q8TBC4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBA3Q8TBC4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
UBA3Q8TBC4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
UBA3Q8TBC4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBA3Q8TBC4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBA3Q8TBC4 AC093525.8-201ENST00000624099 1342 ntBASIC16.24■□□□□ 0.19
UBA3Q8TBC4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.24■□□□□ 0.19
UBA3Q8TBC4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms