Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 AC073869.2-201ENST00000417338 1026 ntBASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 AGGF1P2-201ENST00000426656 2106 ntBASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 KRT8P1-201ENST00000557533 1207 ntBASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL22A1Q8NFW1 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 KRT8P28-201ENST00000433288 1390 ntBASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 AC026471.1-201ENST00000564629 3026 ntBASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 AC007292.2-201ENST00000593524 1812 ntBASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 AC006548.2-201ENST00000605217 529 ntBASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 AC006483.2-201ENST00000609813 515 ntBASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 AL118522.1-201ENST00000611368 560 ntBASIC19.79■□□□□ 0.76
COL22A1Q8NFW1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 AC004554.1-201ENST00000422830 1468 ntBASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 AC012508.2-201ENST00000567613 1472 ntBASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 RN7SL23P-201ENST00000484055 275 ntBASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 CISD2-202ENST00000503643 808 ntTSL 2 BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 TP53-221ENST00000615910 1149 ntTSL 5 BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL22A1Q8NFW1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 JTB-202ENST00000356648 1040 ntTSL 2 BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 AC083801.1-201ENST00000491689 358 ntBASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 HERC2P11-201ENST00000562845 725 ntBASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 AC100756.2-201ENST00000569537 736 ntBASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 AC010632.2-201ENST00000588369 1224 ntBASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL22A1Q8NFW1 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms