Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AL121723.1-201ENST00000445194 1519 ntBASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AC013726.1-201ENST00000563747 2285 ntBASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 WASH3P-207ENST00000560956 1394 ntBASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 FGD5P1-202ENST00000614866 2498 ntBASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 SBF1P1-201ENST00000444527 5631 ntBASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
LINC00346Q8IVM7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 LINC01101-201ENST00000622953 1884 ntBASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 AC067863.1-201ENST00000494933 530 ntBASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 AC097493.3-201ENST00000509725 367 ntBASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 SDHAP3-202ENST00000515467 728 ntBASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 IGHV3-42-201ENST00000520410 361 ntBASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 AC025181.2-201ENST00000606994 802 ntBASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 AP000845.1-201ENST00000581677 2131 ntBASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00346Q8IVM7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms