Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 HIST3H2BA-201ENST00000436555 524 ntBASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 KRT8P12-202ENST00000472924 1397 ntBASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 ST20-AS1-201ENST00000560255 4223 ntBASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 AC084364.1-201ENST00000551967 1556 ntBASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 AC211486.1-202ENST00000416371 468 ntBASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 TARDBPP1-201ENST00000442013 1203 ntBASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 AC211476.1-201ENST00000503899 468 ntBASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 AC087386.2-201ENST00000623212 4637 ntBASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC50Q8IVM0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 RPSAP43-201ENST00000402237 625 ntBASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 RPL5P21-201ENST00000404620 815 ntBASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 SPDYE7P-202ENST00000420373 878 ntBASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 UPF3AP3-201ENST00000420996 769 ntBASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 AL589739.1-201ENST00000607720 493 ntBASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms