Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 KRT18P25-201ENST00000508931 1278 ntBASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 AL365209.1-201ENST00000624418 6473 ntBASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3CQ6NXT2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 RPL5P21-201ENST00000404620 815 ntBASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 HLA-V-201ENST00000429037 534 ntBASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 RNA5SP412-201ENST00000516234 123 ntBASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 AC079316.1-201ENST00000548397 411 ntBASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 AC025279.2-201ENST00000569730 653 ntBASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 AC132938.4-201ENST00000623835 848 ntBASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3CQ6NXT2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms