Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 PDPK2P-202ENST00000562415 1191 ntBASIC14.64□□□□□ -0.07
CHRNB3Q05901 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 AP001160.2-201ENST00000596071 487 ntBASIC14.64□□□□□ -0.07
CHRNB3Q05901 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 AC092865.6-201ENST00000642101 219 ntBASIC14.64□□□□□ -0.07
CHRNB3Q05901 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 AC041040.2-201ENST00000622926 2899 ntBASIC14.64□□□□□ -0.07
CHRNB3Q05901 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 REXO1L2P-201ENST00000425429 2069 ntBASIC14.64□□□□□ -0.07
CHRNB3Q05901 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 PTENP1-202ENST00000532280 3996 ntBASIC14.64□□□□□ -0.07
CHRNB3Q05901 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CHRNB3Q05901 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB3Q05901 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 AC006504.5-208ENST00000588784 2401 ntBASIC14.63□□□□□ -0.07
CHRNB3Q05901 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 HTR5BP-201ENST00000430851 1154 ntBASIC14.63□□□□□ -0.07
CHRNB3Q05901 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 AC074386.1-202ENST00000463561 864 ntBASIC14.63□□□□□ -0.07
CHRNB3Q05901 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 AL513190.1-201ENST00000621254 727 ntBASIC14.63□□□□□ -0.07
CHRNB3Q05901 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 CICP11-201ENST00000434745 2827 ntBASIC14.63□□□□□ -0.07
CHRNB3Q05901 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
CHRNB3Q05901 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB3Q05901 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms