Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.89□□□□□ -0.19
CDK5Q00535 AL079307.3-201ENST00000556114 283 ntBASIC13.89□□□□□ -0.19
CDK5Q00535 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.89□□□□□ -0.19
CDK5Q00535 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.89□□□□□ -0.19
CDK5Q00535 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.89□□□□□ -0.19
CDK5Q00535 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CDK5Q00535 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.89□□□□□ -0.19
CDK5Q00535 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
CDK5Q00535 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.89□□□□□ -0.19
CDK5Q00535 MYO15B-237ENST00000642007 4893 ntBASIC13.89□□□□□ -0.19
CDK5Q00535 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.89□□□□□ -0.19
CDK5Q00535 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.89□□□□□ -0.19
CDK5Q00535 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.88□□□□□ -0.19
CDK5Q00535 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.88□□□□□ -0.19
CDK5Q00535 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CDK5Q00535 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CDK5Q00535 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.88□□□□□ -0.19
CDK5Q00535 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
CDK5Q00535 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.88□□□□□ -0.19
CDK5Q00535 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.88□□□□□ -0.19
CDK5Q00535 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.88□□□□□ -0.19
CDK5Q00535 AC092135.3-201ENST00000624151 1846 ntBASIC13.88□□□□□ -0.19
CDK5Q00535 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.88□□□□□ -0.19
CDK5Q00535 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.88□□□□□ -0.19
CDK5Q00535 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CDK5Q00535 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.88□□□□□ -0.19
CDK5Q00535 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.88□□□□□ -0.19
CDK5Q00535 AC015922.1-201ENST00000421102 1152 ntBASIC13.88□□□□□ -0.19
CDK5Q00535 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.88□□□□□ -0.19
CDK5Q00535 GPS2P2-201ENST00000430745 888 ntBASIC13.88□□□□□ -0.19
CDK5Q00535 MTND6P24-201ENST00000440466 518 ntBASIC13.88□□□□□ -0.19
CDK5Q00535 RPL13P2-201ENST00000440687 659 ntBASIC13.88□□□□□ -0.19
CDK5Q00535 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.88□□□□□ -0.19
CDK5Q00535 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.88□□□□□ -0.19
CDK5Q00535 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.88□□□□□ -0.19
CDK5Q00535 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.88□□□□□ -0.19
CDK5Q00535 AC025048.3-201ENST00000590609 569 ntBASIC13.88□□□□□ -0.19
CDK5Q00535 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.88□□□□□ -0.19
CDK5Q00535 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
CDK5Q00535 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CDK5Q00535 AC005702.4-201ENST00000618393 416 ntBASIC13.88□□□□□ -0.19
CDK5Q00535 AF228730.6-201ENST00000641497 218 ntBASIC13.88□□□□□ -0.19
CDK5Q00535 AC084121.3-201ENST00000641716 218 ntBASIC13.88□□□□□ -0.19
CDK5Q00535 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.88□□□□□ -0.19
CDK5Q00535 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CDK5Q00535 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CDK5Q00535 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.88□□□□□ -0.19
CDK5Q00535 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CDK5Q00535 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CDK5Q00535 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CDK5Q00535 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.88□□□□□ -0.19
CDK5Q00535 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 ELL2P1-201ENST00000413990 1906 ntBASIC13.88□□□□□ -0.19
CDK5Q00535 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDK5Q00535 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CDK5Q00535 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.87□□□□□ -0.19
CDK5Q00535 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.87□□□□□ -0.19
CDK5Q00535 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CDK5Q00535 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.87□□□□□ -0.19
CDK5Q00535 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDK5Q00535 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDK5Q00535 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms