Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
RAE1P78406 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.56□□□□□ -0.08
RAE1P78406 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.56□□□□□ -0.08
RAE1P78406 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.56□□□□□ -0.08
RAE1P78406 VDAC1P7-201ENST00000462417 847 ntBASIC14.56□□□□□ -0.08
RAE1P78406 CYMP-203ENST00000474680 1263 ntBASIC14.56□□□□□ -0.08
RAE1P78406 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.56□□□□□ -0.08
RAE1P78406 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.56□□□□□ -0.08
RAE1P78406 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.56□□□□□ -0.08
RAE1P78406 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.56□□□□□ -0.08
RAE1P78406 MIR8072-201ENST00000614241 80 ntBASIC14.56□□□□□ -0.08
RAE1P78406 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.56□□□□□ -0.08
RAE1P78406 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.56□□□□□ -0.08
RAE1P78406 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.56□□□□□ -0.08
RAE1P78406 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.56□□□□□ -0.08
RAE1P78406 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RAE1P78406 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RAE1P78406 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RAE1P78406 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAE1P78406 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.55□□□□□ -0.08
RAE1P78406 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
RAE1P78406 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.55□□□□□ -0.08
RAE1P78406 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RAE1P78406 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
RAE1P78406 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RAE1P78406 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
RAE1P78406 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RAE1P78406 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.55□□□□□ -0.08
RAE1P78406 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RAE1P78406 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.55□□□□□ -0.08
RAE1P78406 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RAE1P78406 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RAE1P78406 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.55□□□□□ -0.08
RAE1P78406 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.55□□□□□ -0.08
RAE1P78406 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.55□□□□□ -0.08
RAE1P78406 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.55□□□□□ -0.08
RAE1P78406 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.55□□□□□ -0.08
RAE1P78406 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.55□□□□□ -0.08
RAE1P78406 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.55□□□□□ -0.08
RAE1P78406 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RAE1P78406 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.55□□□□□ -0.08
RAE1P78406 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.55□□□□□ -0.08
RAE1P78406 AL158070.2-201ENST00000623713 1621 ntBASIC14.55□□□□□ -0.08
RAE1P78406 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.55□□□□□ -0.08
RAE1P78406 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.55□□□□□ -0.08
RAE1P78406 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAE1P78406 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.54□□□□□ -0.08
RAE1P78406 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAE1P78406 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RAE1P78406 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
RAE1P78406 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAE1P78406 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.54□□□□□ -0.08
RAE1P78406 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAE1P78406 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.54□□□□□ -0.08
RAE1P78406 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.54□□□□□ -0.08
RAE1P78406 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.54□□□□□ -0.08
RAE1P78406 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAE1P78406 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
RAE1P78406 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.54□□□□□ -0.08
RAE1P78406 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms