Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS3AP61247 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS3AP61247 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RPS3AP61247 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.53□□□□□ -0.08
RPS3AP61247 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.53□□□□□ -0.08
RPS3AP61247 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS3AP61247 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.53□□□□□ -0.08
RPS3AP61247 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS3AP61247 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RPS3AP61247 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS3AP61247 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS3AP61247 FO538757.1-201ENST00000623083 1397 ntBASIC14.53□□□□□ -0.08
RPS3AP61247 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RPS3AP61247 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.53□□□□□ -0.08
RPS3AP61247 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.53□□□□□ -0.08
RPS3AP61247 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
RPS3AP61247 HLA-V-204ENST00000476601 1289 ntBASIC14.53□□□□□ -0.08
RPS3AP61247 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.53□□□□□ -0.08
RPS3AP61247 AC027369.6-201ENST00000525520 931 ntBASIC14.53□□□□□ -0.08
RPS3AP61247 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.53□□□□□ -0.08
RPS3AP61247 OR2I1P-209ENST00000641730 5365 ntBASIC14.53□□□□□ -0.08
RPS3AP61247 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
RPS3AP61247 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RPS3AP61247 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RPS3AP61247 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RPS3AP61247 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS3AP61247 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS3AP61247 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.53□□□□□ -0.08
RPS3AP61247 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.53□□□□□ -0.08
RPS3AP61247 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RPS3AP61247 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS3AP61247 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RPS3AP61247 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS3AP61247 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RPS3AP61247 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS3AP61247 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS3AP61247 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS3AP61247 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS3AP61247 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RPS3AP61247 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RPS3AP61247 CICP8-201ENST00000455800 2813 ntBASIC14.52□□□□□ -0.08
RPS3AP61247 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS3AP61247 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RPS3AP61247 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.52□□□□□ -0.08
RPS3AP61247 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RPS3AP61247 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.52□□□□□ -0.08
RPS3AP61247 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS3AP61247 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS3AP61247 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS3AP61247 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RPS3AP61247 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS3AP61247 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS3AP61247 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.52□□□□□ -0.08
RPS3AP61247 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.52□□□□□ -0.08
RPS3AP61247 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPS3AP61247 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.52□□□□□ -0.09
RPS3AP61247 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS3AP61247 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPS3AP61247 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.52□□□□□ -0.09
RPS3AP61247 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.52□□□□□ -0.09
RPS3AP61247 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPS3AP61247 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.52□□□□□ -0.09
RPS3AP61247 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPS3AP61247 AC097493.3-201ENST00000509725 367 ntBASIC14.52□□□□□ -0.09
RPS3AP61247 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPS3AP61247 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.52□□□□□ -0.09
RPS3AP61247 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPS3AP61247 AL390754.1-201ENST00000619088 582 ntBASIC14.52□□□□□ -0.09
RPS3AP61247 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.52□□□□□ -0.09
RPS3AP61247 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS3AP61247 MBLAC2-202ENST00000514906 1936 ntBASIC14.52□□□□□ -0.09
RPS3AP61247 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.52□□□□□ -0.09
RPS3AP61247 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.52□□□□□ -0.09
RPS3AP61247 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS3AP61247 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.52□□□□□ -0.09
RPS3AP61247 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS3AP61247 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
RPS3AP61247 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.52□□□□□ -0.09
RPS3AP61247 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS3AP61247 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS3AP61247 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.52□□□□□ -0.09
RPS3AP61247 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS3AP61247 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
RPS3AP61247 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPS3AP61247 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPS3AP61247 ST20-AS1-201ENST00000560255 4223 ntBASIC14.52□□□□□ -0.09
RPS3AP61247 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RPS3AP61247 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPS3AP61247 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RPS3AP61247 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPS3AP61247 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPS3AP61247 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.51□□□□□ -0.09
RPS3AP61247 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPS3AP61247 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPS3AP61247 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPS3AP61247 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPS3AP61247 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.51□□□□□ -0.09
RPS3AP61247 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.51□□□□□ -0.09
RPS3AP61247 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.51□□□□□ -0.09
RPS3AP61247 AC241585.1-201ENST00000433527 519 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms