Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.82■□□□□ 0.12
ITGA8P53708 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.82■□□□□ 0.12
ITGA8P53708 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
ITGA8P53708 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ITGA8P53708 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.82■□□□□ 0.12
ITGA8P53708 AC018442.1-201ENST00000421439 2061 ntBASIC15.82■□□□□ 0.12
ITGA8P53708 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
ITGA8P53708 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.82■□□□□ 0.12
ITGA8P53708 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.82■□□□□ 0.12
ITGA8P53708 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 AC027601.5-201ENST00000624065 2482 ntBASIC15.82■□□□□ 0.12
ITGA8P53708 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
ITGA8P53708 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.82■□□□□ 0.12
ITGA8P53708 GPS2P2-201ENST00000430745 888 ntBASIC15.82■□□□□ 0.12
ITGA8P53708 CEND1P1-201ENST00000451006 455 ntBASIC15.82■□□□□ 0.12
ITGA8P53708 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.82■□□□□ 0.12
ITGA8P53708 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.82■□□□□ 0.12
ITGA8P53708 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.82■□□□□ 0.12
ITGA8P53708 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.82■□□□□ 0.12
ITGA8P53708 AC093520.2-201ENST00000561830 333 ntBASIC15.82■□□□□ 0.12
ITGA8P53708 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.82■□□□□ 0.12
ITGA8P53708 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.82■□□□□ 0.12
ITGA8P53708 MTDHP5-201ENST00000598980 586 ntBASIC15.82■□□□□ 0.12
ITGA8P53708 AC007967.4-201ENST00000614700 386 ntBASIC15.82■□□□□ 0.12
ITGA8P53708 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.82■□□□□ 0.12
ITGA8P53708 AC041040.2-201ENST00000622926 2899 ntBASIC15.82■□□□□ 0.12
ITGA8P53708 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.82■□□□□ 0.12
ITGA8P53708 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.82■□□□□ 0.12
ITGA8P53708 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 AP001267.2-201ENST00000532619 2086 ntBASIC15.82■□□□□ 0.12
ITGA8P53708 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.82■□□□□ 0.12
ITGA8P53708 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.82■□□□□ 0.12
ITGA8P53708 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITGA8P53708 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ITGA8P53708 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
ITGA8P53708 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.81■□□□□ 0.12
ITGA8P53708 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.81■□□□□ 0.12
ITGA8P53708 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
ITGA8P53708 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.81■□□□□ 0.12
ITGA8P53708 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
ITGA8P53708 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 AL627223.1-201ENST00000416693 442 ntBASIC15.81■□□□□ 0.12
ITGA8P53708 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.81■□□□□ 0.12
ITGA8P53708 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 RBPMS2P1-201ENST00000437762 623 ntBASIC15.81■□□□□ 0.12
ITGA8P53708 SPDYE14P-201ENST00000442619 822 ntBASIC15.81■□□□□ 0.12
ITGA8P53708 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.81■□□□□ 0.12
ITGA8P53708 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.81■□□□□ 0.12
ITGA8P53708 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.81■□□□□ 0.12
ITGA8P53708 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.81■□□□□ 0.12
ITGA8P53708 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.81■□□□□ 0.12
ITGA8P53708 AC010327.4-202ENST00000591484 748 ntBASIC15.81■□□□□ 0.12
ITGA8P53708 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.81■□□□□ 0.12
ITGA8P53708 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.81■□□□□ 0.12
ITGA8P53708 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 AC025181.2-201ENST00000606994 802 ntBASIC15.81■□□□□ 0.12
ITGA8P53708 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
ITGA8P53708 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
ITGA8P53708 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.81■□□□□ 0.12
ITGA8P53708 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
ITGA8P53708 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms