Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
CDC34P49427 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.23□□□□□ -0.45
CDC34P49427 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.23□□□□□ -0.45
CDC34P49427 MIR4751-201ENST00000578027 74 ntBASIC12.23□□□□□ -0.45
CDC34P49427 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.23□□□□□ -0.45
CDC34P49427 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 REXO1L6P-202ENST00000619970 1078 ntBASIC12.23□□□□□ -0.45
CDC34P49427 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.23□□□□□ -0.45
CDC34P49427 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.23□□□□□ -0.45
CDC34P49427 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CDC34P49427 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CDC34P49427 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.23□□□□□ -0.45
CDC34P49427 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CDC34P49427 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.23□□□□□ -0.45
CDC34P49427 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.22□□□□□ -0.45
CDC34P49427 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.22□□□□□ -0.45
CDC34P49427 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CDC34P49427 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.22□□□□□ -0.45
CDC34P49427 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.22□□□□□ -0.45
CDC34P49427 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CDC34P49427 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CDC34P49427 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
CDC34P49427 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.22□□□□□ -0.45
CDC34P49427 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
CDC34P49427 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.22□□□□□ -0.45
CDC34P49427 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.22□□□□□ -0.45
CDC34P49427 AC087388.1-201ENST00000571370 1112 ntBASIC12.22□□□□□ -0.45
CDC34P49427 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.22□□□□□ -0.45
CDC34P49427 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.22□□□□□ -0.45
CDC34P49427 AC008735.5-201ENST00000623544 497 ntBASIC12.22□□□□□ -0.45
CDC34P49427 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.22□□□□□ -0.45
CDC34P49427 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.22□□□□□ -0.45
CDC34P49427 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.22□□□□□ -0.45
CDC34P49427 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
CDC34P49427 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CDC34P49427 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC34P49427 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
CDC34P49427 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.21□□□□□ -0.45
CDC34P49427 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.21□□□□□ -0.45
CDC34P49427 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.21□□□□□ -0.45
CDC34P49427 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
CDC34P49427 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 MBLAC2-202ENST00000514906 1936 ntBASIC12.21□□□□□ -0.45
CDC34P49427 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CDC34P49427 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.21□□□□□ -0.45
CDC34P49427 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.21□□□□□ -0.45
CDC34P49427 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CDC34P49427 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms