Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC9A3P48764 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC9A3P48764 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 AC003101.2-201ENST00000612557 442 ntBASIC14.2□□□□□ -0.14
SLC9A3P48764 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SLC9A3P48764 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC9A3P48764 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC9A3P48764 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 KRT8P12-202ENST00000472924 1397 ntBASIC14.2□□□□□ -0.14
SLC9A3P48764 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SLC9A3P48764 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
SLC9A3P48764 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SLC9A3P48764 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC9A3P48764 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC9A3P48764 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SLC9A3P48764 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC9A3P48764 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC9A3P48764 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 AC005840.4-201ENST00000541242 2494 ntBASIC14.19□□□□□ -0.14
SLC9A3P48764 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC9A3P48764 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC9A3P48764 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.19□□□□□ -0.14
SLC9A3P48764 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC9A3P48764 RBPMS2P1-201ENST00000437762 623 ntBASIC14.19□□□□□ -0.14
SLC9A3P48764 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.19□□□□□ -0.14
SLC9A3P48764 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC9A3P48764 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.19□□□□□ -0.14
SLC9A3P48764 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC9A3P48764 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.19□□□□□ -0.14
SLC9A3P48764 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC9A3P48764 MIR4469-201ENST00000583919 79 ntBASIC14.19□□□□□ -0.14
SLC9A3P48764 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC9A3P48764 AL671883.3-201ENST00000603274 991 ntBASIC14.19□□□□□ -0.14
SLC9A3P48764 AC004835.2-201ENST00000603762 682 ntBASIC14.19□□□□□ -0.14
SLC9A3P48764 RN7SL828P-201ENST00000607615 303 ntBASIC14.19□□□□□ -0.14
SLC9A3P48764 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.19□□□□□ -0.14
SLC9A3P48764 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.19□□□□□ -0.14
SLC9A3P48764 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC9A3P48764 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC9A3P48764 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC9A3P48764 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC9A3P48764 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC9A3P48764 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SLC9A3P48764 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SLC9A3P48764 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SLC9A3P48764 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC9A3P48764 AJ011931.1-201ENST00000618749 2492 ntBASIC14.18□□□□□ -0.14
SLC9A3P48764 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SLC9A3P48764 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.18□□□□□ -0.14
SLC9A3P48764 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SLC9A3P48764 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
SLC9A3P48764 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC9A3P48764 HIST3H2BA-201ENST00000436555 524 ntBASIC14.18□□□□□ -0.14
SLC9A3P48764 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.18□□□□□ -0.14
SLC9A3P48764 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.18□□□□□ -0.14
SLC9A3P48764 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SLC9A3P48764 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 MIR3687-2-201ENST00000577708 61 ntBASIC14.18□□□□□ -0.14
SLC9A3P48764 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC9A3P48764 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms