Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 CLK3P2-201ENST00000427566 1453 ntBASIC13.73□□□□□ -0.21
CSNK1A1P48729 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 AC006058.4-201ENST00000624016 1670 ntBASIC13.72□□□□□ -0.21
CSNK1A1P48729 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 GHSR-202ENST00000427970 912 ntBASIC13.72□□□□□ -0.21
CSNK1A1P48729 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 GNAQP1-201ENST00000444815 1067 ntBASIC13.72□□□□□ -0.21
CSNK1A1P48729 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 TSPY16P-201ENST00000449843 468 ntBASIC13.72□□□□□ -0.21
CSNK1A1P48729 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 FAM86LP-201ENST00000478302 853 ntBASIC13.72□□□□□ -0.21
CSNK1A1P48729 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 AC055876.2-201ENST00000531834 546 ntBASIC13.72□□□□□ -0.21
CSNK1A1P48729 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 AL391069.4-201ENST00000609583 481 ntBASIC13.72□□□□□ -0.21
CSNK1A1P48729 AC004790.1-201ENST00000612686 536 ntBASIC13.72□□□□□ -0.21
CSNK1A1P48729 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 AL645728.2-202ENST00000641679 227 ntBASIC13.72□□□□□ -0.21
CSNK1A1P48729 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1A1P48729 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CSNK1A1P48729 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms