Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC6A12P48065 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC6A12P48065 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC6A12P48065 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC6A12P48065 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC6A12P48065 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.8□□□□□ -0.04
SLC6A12P48065 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC6A12P48065 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC6A12P48065 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC6A12P48065 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC6A12P48065 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC6A12P48065 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC6A12P48065 RN7SL204P-201ENST00000582831 262 ntBASIC14.8□□□□□ -0.04
SLC6A12P48065 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC6A12P48065 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC6A12P48065 LINC02560-201ENST00000596379 459 ntBASIC14.8□□□□□ -0.04
SLC6A12P48065 CHCHD2P3-201ENST00000603038 451 ntBASIC14.8□□□□□ -0.04
SLC6A12P48065 TMEM261P1-201ENST00000604899 340 ntBASIC14.8□□□□□ -0.04
SLC6A12P48065 AL355385.1-201ENST00000606123 409 ntBASIC14.8□□□□□ -0.04
SLC6A12P48065 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC6A12P48065 AC008761.3-201ENST00000624803 892 ntBASIC14.8□□□□□ -0.04
SLC6A12P48065 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 KRT8P22-201ENST00000562317 1415 ntBASIC14.8□□□□□ -0.04
SLC6A12P48065 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 AC007541.1-201ENST00000570282 1469 ntBASIC14.8□□□□□ -0.04
SLC6A12P48065 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC6A12P48065 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC6A12P48065 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC6A12P48065 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC6A12P48065 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC6A12P48065 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC6A12P48065 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SLC6A12P48065 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 C1QBPP1-201ENST00000400117 770 ntBASIC14.79□□□□□ -0.04
SLC6A12P48065 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC6A12P48065 NUS1P3-201ENST00000423502 862 ntBASIC14.79□□□□□ -0.04
SLC6A12P48065 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC6A12P48065 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC6A12P48065 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.79□□□□□ -0.04
SLC6A12P48065 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 API5-211ENST00000534695 560 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC6A12P48065 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC6A12P48065 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 AL359711.2-201ENST00000563105 872 ntBASIC14.79□□□□□ -0.04
SLC6A12P48065 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SLC6A12P48065 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SLC6A12P48065 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC6A12P48065 AC004233.3-201ENST00000607794 1269 ntBASIC14.79□□□□□ -0.04
SLC6A12P48065 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SLC6A12P48065 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC6A12P48065 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
SLC6A12P48065 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC6A12P48065 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SLC6A12P48065 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC6A12P48065 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A12P48065 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SLC6A12P48065 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC6A12P48065 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC6A12P48065 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 AC007292.2-201ENST00000593524 1812 ntBASIC14.78□□□□□ -0.04
SLC6A12P48065 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms