Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CHRNA3P32297 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNA3P32297 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNA3P32297 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CHRNA3P32297 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNA3P32297 AC084364.1-201ENST00000551967 1556 ntBASIC16.26■□□□□ 0.19
CHRNA3P32297 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 AZGP1P1-201ENST00000411909 902 ntBASIC16.25■□□□□ 0.19
CHRNA3P32297 COX20P2-201ENST00000452636 358 ntBASIC16.25■□□□□ 0.19
CHRNA3P32297 ZNF890P-202ENST00000530367 1156 ntBASIC16.25■□□□□ 0.19
CHRNA3P32297 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CHRNA3P32297 MIR6069-201ENST00000620069 79 ntBASIC16.25■□□□□ 0.19
CHRNA3P32297 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.25■□□□□ 0.19
CHRNA3P32297 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.25■□□□□ 0.19
CHRNA3P32297 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.25■□□□□ 0.19
CHRNA3P32297 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.25■□□□□ 0.19
CHRNA3P32297 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CHRNA3P32297 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.25■□□□□ 0.19
CHRNA3P32297 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CHRNA3P32297 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CHRNA3P32297 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CHRNA3P32297 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.25■□□□□ 0.19
CHRNA3P32297 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CHRNA3P32297 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA3P32297 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRNA3P32297 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.24■□□□□ 0.19
CHRNA3P32297 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CHRNA3P32297 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
CHRNA3P32297 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRNA3P32297 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRNA3P32297 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.24■□□□□ 0.19
CHRNA3P32297 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRNA3P32297 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.24■□□□□ 0.19
CHRNA3P32297 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.24■□□□□ 0.19
CHRNA3P32297 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CHRNA3P32297 CICP14-201ENST00000629111 2732 ntBASIC16.24■□□□□ 0.19
CHRNA3P32297 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CHRNA3P32297 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.24■□□□□ 0.19
CHRNA3P32297 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.24■□□□□ 0.19
CHRNA3P32297 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRNA3P32297 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRNA3P32297 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.24■□□□□ 0.19
CHRNA3P32297 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRNA3P32297 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CHRNA3P32297 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRNA3P32297 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.24■□□□□ 0.19
CHRNA3P32297 AC004840.1-201ENST00000636359 365 ntBASIC16.24■□□□□ 0.19
CHRNA3P32297 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRNA3P32297 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CHRNA3P32297 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRNA3P32297 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 AL359258.3-201ENST00000622910 2331 ntBASIC16.24■□□□□ 0.19
CHRNA3P32297 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CHRNA3P32297 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA3P32297 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms