Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GDF1P27539 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.94□□□□□ -0.18
GDF1P27539 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
GDF1P27539 AC016694.1-201ENST00000434179 700 ntBASIC13.94□□□□□ -0.18
GDF1P27539 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GDF1P27539 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
GDF1P27539 FTH1P14-201ENST00000482930 551 ntBASIC13.94□□□□□ -0.18
GDF1P27539 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.94□□□□□ -0.18
GDF1P27539 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.94□□□□□ -0.18
GDF1P27539 SNX29P1-201ENST00000548357 1007 ntBASIC13.94□□□□□ -0.18
GDF1P27539 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.94□□□□□ -0.18
GDF1P27539 SAMD11P1-201ENST00000571429 661 ntBASIC13.94□□□□□ -0.18
GDF1P27539 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
GDF1P27539 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.94□□□□□ -0.18
GDF1P27539 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.94□□□□□ -0.18
GDF1P27539 MIR6775-201ENST00000617557 69 ntBASIC13.94□□□□□ -0.18
GDF1P27539 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.94□□□□□ -0.18
GDF1P27539 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.94□□□□□ -0.18
GDF1P27539 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.94□□□□□ -0.18
GDF1P27539 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.94□□□□□ -0.18
GDF1P27539 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.94□□□□□ -0.18
GDF1P27539 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GDF1P27539 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
GDF1P27539 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.94□□□□□ -0.18
GDF1P27539 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
GDF1P27539 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GDF1P27539 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDF1P27539 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
GDF1P27539 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
GDF1P27539 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 AC007787.1-201ENST00000588095 1583 ntBASIC13.93□□□□□ -0.18
GDF1P27539 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.93□□□□□ -0.18
GDF1P27539 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.93□□□□□ -0.18
GDF1P27539 AC092933.1-201ENST00000393644 945 ntBASIC13.93□□□□□ -0.18
GDF1P27539 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 AC007551.1-201ENST00000457394 519 ntBASIC13.93□□□□□ -0.18
GDF1P27539 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.93□□□□□ -0.18
GDF1P27539 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.93□□□□□ -0.18
GDF1P27539 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
GDF1P27539 COX11-210ENST00000639671 696 ntBASIC13.93□□□□□ -0.18
GDF1P27539 AL645728.2-202ENST00000641679 227 ntBASIC13.93□□□□□ -0.18
GDF1P27539 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
GDF1P27539 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
GDF1P27539 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.93□□□□□ -0.18
GDF1P27539 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
GDF1P27539 LRRC59-203ENST00000576448 1531 ntBASIC13.93□□□□□ -0.18
GDF1P27539 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.93□□□□□ -0.18
GDF1P27539 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.93□□□□□ -0.18
GDF1P27539 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDF1P27539 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 AC093525.8-201ENST00000624099 1342 ntBASIC13.92□□□□□ -0.18
GDF1P27539 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 MYO15B-237ENST00000642007 4893 ntBASIC13.92□□□□□ -0.18
GDF1P27539 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.92□□□□□ -0.18
GDF1P27539 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.92□□□□□ -0.18
GDF1P27539 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms