Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
COL8A2P25067 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13□□□□□ -0.33
COL8A2P25067 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13□□□□□ -0.33
COL8A2P25067 AC009090.5-201ENST00000624886 2285 ntBASIC13□□□□□ -0.33
COL8A2P25067 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13□□□□□ -0.33
COL8A2P25067 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13□□□□□ -0.33
COL8A2P25067 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13□□□□□ -0.33
COL8A2P25067 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13□□□□□ -0.33
COL8A2P25067 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13□□□□□ -0.33
COL8A2P25067 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13□□□□□ -0.33
COL8A2P25067 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13□□□□□ -0.33
COL8A2P25067 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13□□□□□ -0.33
COL8A2P25067 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13□□□□□ -0.33
COL8A2P25067 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13□□□□□ -0.33
COL8A2P25067 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13□□□□□ -0.33
COL8A2P25067 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13□□□□□ -0.33
COL8A2P25067 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13□□□□□ -0.33
COL8A2P25067 AC244669.2-201ENST00000612320 853 ntBASIC13□□□□□ -0.33
COL8A2P25067 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13□□□□□ -0.33
COL8A2P25067 AP005019.2-201ENST00000615104 511 ntBASIC13□□□□□ -0.33
COL8A2P25067 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13□□□□□ -0.33
COL8A2P25067 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13□□□□□ -0.33
COL8A2P25067 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
COL8A2P25067 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13□□□□□ -0.33
COL8A2P25067 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13□□□□□ -0.33
COL8A2P25067 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
COL8A2P25067 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COL8A2P25067 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
COL8A2P25067 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
COL8A2P25067 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.99□□□□□ -0.33
COL8A2P25067 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.99□□□□□ -0.33
COL8A2P25067 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.99□□□□□ -0.33
COL8A2P25067 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.99□□□□□ -0.33
COL8A2P25067 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 NFIC-211ENST00000641145 8399 ntBASIC12.99□□□□□ -0.33
COL8A2P25067 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.99□□□□□ -0.33
COL8A2P25067 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
COL8A2P25067 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.99□□□□□ -0.33
COL8A2P25067 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.99□□□□□ -0.33
COL8A2P25067 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.99□□□□□ -0.33
COL8A2P25067 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
COL8A2P25067 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.99□□□□□ -0.33
COL8A2P25067 BNIP3P42-201ENST00000454982 569 ntBASIC12.99□□□□□ -0.33
COL8A2P25067 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.99□□□□□ -0.33
COL8A2P25067 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.99□□□□□ -0.33
COL8A2P25067 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.99□□□□□ -0.33
COL8A2P25067 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.99□□□□□ -0.33
COL8A2P25067 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.99□□□□□ -0.33
COL8A2P25067 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.99□□□□□ -0.33
COL8A2P25067 BNIP3P29-201ENST00000598302 571 ntBASIC12.99□□□□□ -0.33
COL8A2P25067 AC011447.5-201ENST00000616168 564 ntBASIC12.99□□□□□ -0.33
COL8A2P25067 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.99□□□□□ -0.33
COL8A2P25067 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.99□□□□□ -0.33
COL8A2P25067 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.99□□□□□ -0.33
COL8A2P25067 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.99□□□□□ -0.33
COL8A2P25067 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
COL8A2P25067 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms