Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 TNRC18P2-201ENST00000417666 2714 ntBASIC13.63□□□□□ -0.23
MSR1P21757 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.63□□□□□ -0.23
MSR1P21757 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
MSR1P21757 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.63□□□□□ -0.23
MSR1P21757 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 OR2I1P-210ENST00000642037 4691 ntBASIC13.63□□□□□ -0.23
MSR1P21757 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
MSR1P21757 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.63□□□□□ -0.23
MSR1P21757 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.63□□□□□ -0.23
MSR1P21757 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.63□□□□□ -0.23
MSR1P21757 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.63□□□□□ -0.23
MSR1P21757 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 AC005498.2-205ENST00000593218 784 ntBASIC13.63□□□□□ -0.23
MSR1P21757 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.63□□□□□ -0.23
MSR1P21757 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
MSR1P21757 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.63□□□□□ -0.23
MSR1P21757 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.63□□□□□ -0.23
MSR1P21757 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
MSR1P21757 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.63□□□□□ -0.23
MSR1P21757 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.63□□□□□ -0.23
MSR1P21757 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.63□□□□□ -0.23
MSR1P21757 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
MSR1P21757 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.62□□□□□ -0.23
MSR1P21757 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
MSR1P21757 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
MSR1P21757 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
MSR1P21757 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
MSR1P21757 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.62□□□□□ -0.23
MSR1P21757 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
MSR1P21757 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.62□□□□□ -0.23
MSR1P21757 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.62□□□□□ -0.23
MSR1P21757 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.62□□□□□ -0.23
MSR1P21757 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.62□□□□□ -0.23
MSR1P21757 SPDYE18-201ENST00000510091 1050 ntBASIC13.62□□□□□ -0.23
MSR1P21757 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 RNA5SP421-201ENST00000516864 134 ntBASIC13.62□□□□□ -0.23
MSR1P21757 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.62□□□□□ -0.23
MSR1P21757 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.62□□□□□ -0.23
MSR1P21757 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.62□□□□□ -0.23
MSR1P21757 AC104794.3-201ENST00000566840 1248 ntBASIC13.62□□□□□ -0.23
MSR1P21757 AC036164.1-201ENST00000570544 333 ntBASIC13.62□□□□□ -0.23
MSR1P21757 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
MSR1P21757 AC011467.4-201ENST00000594891 528 ntBASIC13.62□□□□□ -0.23
MSR1P21757 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.62□□□□□ -0.23
MSR1P21757 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.62□□□□□ -0.23
MSR1P21757 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
MSR1P21757 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
MSR1P21757 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.62□□□□□ -0.23
MSR1P21757 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
MSR1P21757 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
MSR1P21757 ZBED1P1-201ENST00000502364 1930 ntBASIC13.62□□□□□ -0.23
MSR1P21757 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MSR1P21757 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.62□□□□□ -0.23
MSR1P21757 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms