Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD58P19256 RPL13AP25-201ENST00000484130 612 ntBASIC16.52■□□□□ 0.24
CD58P19256 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CD58P19256 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.52■□□□□ 0.24
CD58P19256 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.52■□□□□ 0.24
CD58P19256 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.52■□□□□ 0.24
CD58P19256 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD58P19256 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.52■□□□□ 0.24
CD58P19256 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.52■□□□□ 0.24
CD58P19256 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CD58P19256 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD58P19256 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD58P19256 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CD58P19256 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD58P19256 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD58P19256 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.52■□□□□ 0.23
CD58P19256 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD58P19256 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD58P19256 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD58P19256 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD58P19256 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CD58P19256 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD58P19256 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD58P19256 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CD58P19256 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD58P19256 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD58P19256 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CD58P19256 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD58P19256 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CD58P19256 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CD58P19256 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
CD58P19256 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 AC006058.4-201ENST00000624016 1670 ntBASIC16.51■□□□□ 0.23
CD58P19256 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.51■□□□□ 0.23
CD58P19256 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.51■□□□□ 0.23
CD58P19256 AC026410.3-201ENST00000514280 936 ntBASIC16.51■□□□□ 0.23
CD58P19256 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.51■□□□□ 0.23
CD58P19256 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 AC120045.2-201ENST00000567334 178 ntBASIC16.51■□□□□ 0.23
CD58P19256 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CD58P19256 TMEM261P1-201ENST00000604899 340 ntBASIC16.51■□□□□ 0.23
CD58P19256 WFDC1-204ENST00000613603 549 ntBASIC16.51■□□□□ 0.23
CD58P19256 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.51■□□□□ 0.23
CD58P19256 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.51■□□□□ 0.23
CD58P19256 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 PCDHA3-202ENST00000532566 4594 ntBASIC16.51■□□□□ 0.23
CD58P19256 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CD58P19256 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CD58P19256 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.51■□□□□ 0.23
CD58P19256 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.51■□□□□ 0.23
CD58P19256 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CD58P19256 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD58P19256 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.5■□□□□ 0.23
CD58P19256 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CD58P19256 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.5■□□□□ 0.23
CD58P19256 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.5■□□□□ 0.23
CD58P19256 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 C1QBPP1-201ENST00000400117 770 ntBASIC16.5■□□□□ 0.23
CD58P19256 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.5■□□□□ 0.23
CD58P19256 AL442647.2-201ENST00000429864 857 ntBASIC16.5■□□□□ 0.23
CD58P19256 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.5■□□□□ 0.23
CD58P19256 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 GAPDHP40-201ENST00000505218 1006 ntBASIC16.5■□□□□ 0.23
CD58P19256 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.5■□□□□ 0.23
CD58P19256 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.5■□□□□ 0.23
CD58P19256 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.5■□□□□ 0.23
CD58P19256 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CD58P19256 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD58P19256 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms