Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
ATF1P18846 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.56□□□□□ -0.24
ATF1P18846 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.55□□□□□ -0.24
ATF1P18846 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
ATF1P18846 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.55□□□□□ -0.24
ATF1P18846 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 AL137784.3-201ENST00000623858 2288 ntBASIC13.55□□□□□ -0.24
ATF1P18846 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
ATF1P18846 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ATF1P18846 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.55□□□□□ -0.24
ATF1P18846 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.55□□□□□ -0.24
ATF1P18846 ALG1L5P-201ENST00000482043 771 ntBASIC13.55□□□□□ -0.24
ATF1P18846 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.55□□□□□ -0.24
ATF1P18846 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.55□□□□□ -0.24
ATF1P18846 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.55□□□□□ -0.24
ATF1P18846 AC105339.1-204ENST00000636249 355 ntBASIC13.55□□□□□ -0.24
ATF1P18846 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.55□□□□□ -0.24
ATF1P18846 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ATF1P18846 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.55□□□□□ -0.24
ATF1P18846 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.55□□□□□ -0.24
ATF1P18846 AP000845.1-201ENST00000581677 2131 ntBASIC13.55□□□□□ -0.24
ATF1P18846 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ATF1P18846 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
ATF1P18846 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.55□□□□□ -0.24
ATF1P18846 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ATF1P18846 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ATF1P18846 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 ELL2P1-201ENST00000413990 1906 ntBASIC13.54□□□□□ -0.24
ATF1P18846 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.54□□□□□ -0.24
ATF1P18846 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
ATF1P18846 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
ATF1P18846 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 AC084364.1-201ENST00000551967 1556 ntBASIC13.54□□□□□ -0.24
ATF1P18846 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.54□□□□□ -0.24
ATF1P18846 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
ATF1P18846 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
ATF1P18846 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 CEND1P1-201ENST00000451006 455 ntBASIC13.54□□□□□ -0.24
ATF1P18846 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.54□□□□□ -0.24
ATF1P18846 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.54□□□□□ -0.24
ATF1P18846 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.54□□□□□ -0.24
ATF1P18846 ALG1L8P-201ENST00000533887 760 ntBASIC13.54□□□□□ -0.24
ATF1P18846 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.54□□□□□ -0.24
ATF1P18846 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.54□□□□□ -0.24
ATF1P18846 AC105021.1-202ENST00000570572 669 ntBASIC13.54□□□□□ -0.24
ATF1P18846 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.54□□□□□ -0.24
ATF1P18846 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
ATF1P18846 AC011467.4-201ENST00000594891 528 ntBASIC13.54□□□□□ -0.24
ATF1P18846 AC022145.2-201ENST00000598203 171 ntBASIC13.54□□□□□ -0.24
ATF1P18846 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ATF1P18846 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.54□□□□□ -0.24
ATF1P18846 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ATF1P18846 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.54□□□□□ -0.24
ATF1P18846 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms