Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.61□□□□□ -0.39
DEFA4P12838 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.61□□□□□ -0.39
DEFA4P12838 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA4P12838 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.61□□□□□ -0.39
DEFA4P12838 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.61□□□□□ -0.39
DEFA4P12838 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.61□□□□□ -0.39
DEFA4P12838 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA4P12838 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.61□□□□□ -0.39
DEFA4P12838 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA4P12838 LINC01225-203ENST00000563550 1244 ntBASIC12.61□□□□□ -0.39
DEFA4P12838 RARRES2P9-201ENST00000565168 469 ntBASIC12.61□□□□□ -0.39
DEFA4P12838 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.61□□□□□ -0.39
DEFA4P12838 MIR4469-201ENST00000583919 79 ntBASIC12.61□□□□□ -0.39
DEFA4P12838 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.61□□□□□ -0.39
DEFA4P12838 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA4P12838 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA4P12838 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
DEFA4P12838 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
DEFA4P12838 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
DEFA4P12838 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
DEFA4P12838 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA4P12838 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA4P12838 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA4P12838 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA4P12838 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.6□□□□□ -0.39
DEFA4P12838 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA4P12838 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
DEFA4P12838 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
DEFA4P12838 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.6□□□□□ -0.39
DEFA4P12838 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
DEFA4P12838 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 AC018892.3-201ENST00000623986 2499 ntBASIC12.6□□□□□ -0.39
DEFA4P12838 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.6□□□□□ -0.39
DEFA4P12838 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.6□□□□□ -0.39
DEFA4P12838 BX842568.4-201ENST00000421222 227 ntBASIC12.6□□□□□ -0.39
DEFA4P12838 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA4P12838 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 AC069335.1-201ENST00000489972 472 ntBASIC12.6□□□□□ -0.39
DEFA4P12838 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.6□□□□□ -0.39
DEFA4P12838 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.6□□□□□ -0.39
DEFA4P12838 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.6□□□□□ -0.39
DEFA4P12838 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.6□□□□□ -0.39
DEFA4P12838 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.6□□□□□ -0.39
DEFA4P12838 AC105339.1-204ENST00000636249 355 ntBASIC12.6□□□□□ -0.39
DEFA4P12838 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.6□□□□□ -0.39
DEFA4P12838 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA4P12838 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.6□□□□□ -0.39
DEFA4P12838 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA4P12838 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.6□□□□□ -0.39
DEFA4P12838 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.6□□□□□ -0.39
DEFA4P12838 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA4P12838 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA4P12838 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA4P12838 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.6□□□□□ -0.39
DEFA4P12838 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.59□□□□□ -0.39
DEFA4P12838 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
DEFA4P12838 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA4P12838 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.59□□□□□ -0.39
DEFA4P12838 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms