Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC092580.3-201ENST00000430932 139 ntBASIC15.07■□□□□ 0
PCNAP12004 KRT18P64-201ENST00000434946 1219 ntBASIC15.07■□□□□ 0
PCNAP12004 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.07■□□□□ 0
PCNAP12004 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.07■□□□□ 0
PCNAP12004 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.07■□□□□ 0
PCNAP12004 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCNAP12004 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.07■□□□□ 0
PCNAP12004 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.07■□□□□ 0
PCNAP12004 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PCNAP12004 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.07■□□□□ 0
PCNAP12004 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.07■□□□□ 0
PCNAP12004 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCNAP12004 AL158211.3-201ENST00000607385 239 ntBASIC15.07■□□□□ 0
PCNAP12004 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.07■□□□□ 0
PCNAP12004 AC006538.3-201ENST00000612495 578 ntBASIC15.07■□□□□ 0
PCNAP12004 AC106028.4-201ENST00000614509 607 ntBASIC15.07■□□□□ 0
PCNAP12004 AF228730.6-201ENST00000641497 218 ntBASIC15.07■□□□□ 0
PCNAP12004 AC084121.3-201ENST00000641716 218 ntBASIC15.07■□□□□ 0
PCNAP12004 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
PCNAP12004 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCNAP12004 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PCNAP12004 SBF1P1-201ENST00000444527 5631 ntBASIC15.07■□□□□ 0
PCNAP12004 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.07■□□□□ 0
PCNAP12004 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCNAP12004 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.07■□□□□ 0
PCNAP12004 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCNAP12004 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCNAP12004 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
PCNAP12004 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCNAP12004 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.07■□□□□ 0
PCNAP12004 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCNAP12004 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.07■□□□□ 0
PCNAP12004 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.07■□□□□ 0
PCNAP12004 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PCNAP12004 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCNAP12004 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.07■□□□□ 0
PCNAP12004 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCNAP12004 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PCNAP12004 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCNAP12004 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCNAP12004 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.06■□□□□ 0
PCNAP12004 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.06■□□□□ 0
PCNAP12004 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PCNAP12004 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCNAP12004 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PCNAP12004 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
PCNAP12004 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PCNAP12004 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
PCNAP12004 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PCNAP12004 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.06■□□□□ 0
PCNAP12004 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PCNAP12004 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PCNAP12004 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.06■□□□□ 0
PCNAP12004 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
PCNAP12004 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.06■□□□□ 0
PCNAP12004 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.06■□□□□ 0
PCNAP12004 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCNAP12004 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.06■□□□□ 0
PCNAP12004 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.06■□□□□ 0
PCNAP12004 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.06■□□□□ 0
PCNAP12004 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCNAP12004 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.06■□□□□ 0
PCNAP12004 LINC01115-203ENST00000606068 577 ntBASIC15.06■□□□□ 0
PCNAP12004 AC074044.1-201ENST00000609673 707 ntBASIC15.06■□□□□ 0
PCNAP12004 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.06■□□□□ 0
PCNAP12004 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCNAP12004 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.06■□□□□ 0
PCNAP12004 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCNAP12004 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
PCNAP12004 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCNAP12004 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.06■□□□□ 0
PCNAP12004 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.06■□□□□ 0
PCNAP12004 AC100757.3-201ENST00000622361 1406 ntBASIC15.06■□□□□ 0
PCNAP12004 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.06■□□□□ 0
PCNAP12004 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCNAP12004 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCNAP12004 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
PCNAP12004 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.06■□□□□ 0
PCNAP12004 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.06■□□□□ 0
PCNAP12004 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.06■□□□□ 0
PCNAP12004 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.06■□□□□ 0
PCNAP12004 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PCNAP12004 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.06■□□□□ 0
PCNAP12004 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.06■□□□□ 0
PCNAP12004 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
PCNAP12004 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
PCNAP12004 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
PCNAP12004 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCNAP12004 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.05■□□□□ 0
PCNAP12004 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.05■□□□□ 0
PCNAP12004 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
PCNAP12004 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCNAP12004 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCNAP12004 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCNAP12004 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCNAP12004 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
PCNAP12004 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCNAP12004 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PCNAP12004 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.05■□□□□ -0
PCNAP12004 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms