Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.06■□□□□ 0.48
TOP1P11387 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 AC006058.4-201ENST00000624016 1670 ntBASIC18.06■□□□□ 0.48
TOP1P11387 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.06■□□□□ 0.48
TOP1P11387 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TOP1P11387 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TOP1P11387 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
TOP1P11387 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.06■□□□□ 0.48
TOP1P11387 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.06■□□□□ 0.48
TOP1P11387 BAATP1-201ENST00000412284 1225 ntBASIC18.06■□□□□ 0.48
TOP1P11387 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.06■□□□□ 0.48
TOP1P11387 ARSEP1-201ENST00000420443 635 ntBASIC18.06■□□□□ 0.48
TOP1P11387 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.06■□□□□ 0.48
TOP1P11387 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.06■□□□□ 0.48
TOP1P11387 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.06■□□□□ 0.48
TOP1P11387 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.06■□□□□ 0.48
TOP1P11387 HILS1-202ENST00000545329 423 ntBASIC18.06■□□□□ 0.48
TOP1P11387 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.06■□□□□ 0.48
TOP1P11387 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.06■□□□□ 0.48
TOP1P11387 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.06■□□□□ 0.48
TOP1P11387 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP1P11387 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.06■□□□□ 0.48
TOP1P11387 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.06■□□□□ 0.48
TOP1P11387 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TOP1P11387 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TOP1P11387 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.05■□□□□ 0.48
TOP1P11387 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.05■□□□□ 0.48
TOP1P11387 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 AC018665.1-201ENST00000622927 1362 ntBASIC18.05■□□□□ 0.48
TOP1P11387 AC020658.6-201ENST00000623564 1870 ntBASIC18.05■□□□□ 0.48
TOP1P11387 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.05■□□□□ 0.48
TOP1P11387 TNRC18P2-201ENST00000417666 2714 ntBASIC18.05■□□□□ 0.48
TOP1P11387 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
TOP1P11387 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
TOP1P11387 AC005229.1-201ENST00000392885 409 ntBASIC18.05■□□□□ 0.48
TOP1P11387 AC012441.1-201ENST00000446669 685 ntBASIC18.05■□□□□ 0.48
TOP1P11387 ACA64.2-201ENST00000459014 129 ntBASIC18.05■□□□□ 0.48
TOP1P11387 AC022137.2-201ENST00000503482 481 ntBASIC18.05■□□□□ 0.48
TOP1P11387 AP001889.1-201ENST00000525414 633 ntBASIC18.05■□□□□ 0.48
TOP1P11387 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.05■□□□□ 0.48
TOP1P11387 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.05■□□□□ 0.48
TOP1P11387 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.05■□□□□ 0.48
TOP1P11387 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.05■□□□□ 0.48
TOP1P11387 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.05■□□□□ 0.48
TOP1P11387 BX539320.1-201ENST00000623759 877 ntBASIC18.05■□□□□ 0.48
TOP1P11387 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TOP1P11387 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.05■□□□□ 0.48
TOP1P11387 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
TOP1P11387 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.05■□□□□ 0.48
TOP1P11387 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.05■□□□□ 0.48
TOP1P11387 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC18.05■□□□□ 0.48
TOP1P11387 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP1P11387 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.05■□□□□ 0.48
TOP1P11387 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.04■□□□□ 0.48
TOP1P11387 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TOP1P11387 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TOP1P11387 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms