Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.94□□□□□ -0.18
FREM3P0C091 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.94□□□□□ -0.18
FREM3P0C091 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.94□□□□□ -0.18
FREM3P0C091 AP001582.1-201ENST00000525856 295 ntBASIC13.94□□□□□ -0.18
FREM3P0C091 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.94□□□□□ -0.18
FREM3P0C091 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.94□□□□□ -0.18
FREM3P0C091 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.94□□□□□ -0.18
FREM3P0C091 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
FREM3P0C091 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
FREM3P0C091 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
FREM3P0C091 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.94□□□□□ -0.18
FREM3P0C091 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.94□□□□□ -0.18
FREM3P0C091 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.94□□□□□ -0.18
FREM3P0C091 MIR658-201ENST00000385210 100 ntBASIC13.94□□□□□ -0.18
FREM3P0C091 AC016694.1-201ENST00000434179 700 ntBASIC13.94□□□□□ -0.18
FREM3P0C091 CTBP2P5-201ENST00000454986 1264 ntBASIC13.94□□□□□ -0.18
FREM3P0C091 CROCCP4-201ENST00000457096 498 ntBASIC13.94□□□□□ -0.18
FREM3P0C091 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.94□□□□□ -0.18
FREM3P0C091 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.94□□□□□ -0.18
FREM3P0C091 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
FREM3P0C091 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
FREM3P0C091 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.93□□□□□ -0.18
FREM3P0C091 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
FREM3P0C091 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.93□□□□□ -0.18
FREM3P0C091 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
FREM3P0C091 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.93□□□□□ -0.18
FREM3P0C091 POM121L8P-201ENST00000417732 1281 ntBASIC13.93□□□□□ -0.18
FREM3P0C091 POM121L9P-203ENST00000441984 1285 ntBASIC13.93□□□□□ -0.18
FREM3P0C091 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.93□□□□□ -0.18
FREM3P0C091 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.93□□□□□ -0.18
FREM3P0C091 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.93□□□□□ -0.18
FREM3P0C091 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.93□□□□□ -0.18
FREM3P0C091 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
FREM3P0C091 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
FREM3P0C091 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
FREM3P0C091 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
FREM3P0C091 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
FREM3P0C091 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
FREM3P0C091 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
FREM3P0C091 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.93□□□□□ -0.18
FREM3P0C091 LINC00528-201ENST00000600723 2160 ntBASIC13.93□□□□□ -0.18
FREM3P0C091 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.93□□□□□ -0.18
FREM3P0C091 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms