Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.93■□□□□ 0.14
CD48P09326 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CD48P09326 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.93■□□□□ 0.14
CD48P09326 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CD48P09326 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.93■□□□□ 0.14
CD48P09326 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CD48P09326 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.93■□□□□ 0.14
CD48P09326 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.93■□□□□ 0.14
CD48P09326 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD48P09326 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD48P09326 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CD48P09326 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.93■□□□□ 0.14
CD48P09326 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CD48P09326 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD48P09326 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.92■□□□□ 0.14
CD48P09326 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.92■□□□□ 0.14
CD48P09326 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CD48P09326 AC023908.3-201ENST00000564211 3047 ntBASIC15.92■□□□□ 0.14
CD48P09326 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CD48P09326 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CD48P09326 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CD48P09326 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.92■□□□□ 0.14
CD48P09326 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CD48P09326 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.92■□□□□ 0.14
CD48P09326 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.92■□□□□ 0.14
CD48P09326 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.92■□□□□ 0.14
CD48P09326 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.92■□□□□ 0.14
CD48P09326 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.92■□□□□ 0.14
CD48P09326 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.92■□□□□ 0.14
CD48P09326 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.92■□□□□ 0.14
CD48P09326 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.92■□□□□ 0.14
CD48P09326 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.92■□□□□ 0.14
CD48P09326 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.92■□□□□ 0.14
CD48P09326 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.92■□□□□ 0.14
CD48P09326 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.92■□□□□ 0.14
CD48P09326 AC036164.1-201ENST00000570544 333 ntBASIC15.92■□□□□ 0.14
CD48P09326 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.92■□□□□ 0.14
CD48P09326 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.92■□□□□ 0.14
CD48P09326 AL049840.4-201ENST00000602422 811 ntBASIC15.92■□□□□ 0.14
CD48P09326 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.92■□□□□ 0.14
CD48P09326 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.92■□□□□ 0.14
CD48P09326 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.92■□□□□ 0.14
CD48P09326 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.92■□□□□ 0.14
CD48P09326 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
CD48P09326 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CD48P09326 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.92■□□□□ 0.14
CD48P09326 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CD48P09326 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.91■□□□□ 0.14
CD48P09326 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.91■□□□□ 0.14
CD48P09326 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.91■□□□□ 0.14
CD48P09326 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.91■□□□□ 0.14
CD48P09326 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CD48P09326 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CD48P09326 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.91■□□□□ 0.14
CD48P09326 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 MIR661-201ENST00000384842 89 ntBASIC15.91■□□□□ 0.14
CD48P09326 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.91■□□□□ 0.14
CD48P09326 MIR770-201ENST00000390219 98 ntBASIC15.91■□□□□ 0.14
CD48P09326 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.91■□□□□ 0.14
CD48P09326 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.91■□□□□ 0.14
CD48P09326 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 SPTLC1P1-201ENST00000447199 261 ntBASIC15.91■□□□□ 0.14
CD48P09326 VDAC1P7-201ENST00000462417 847 ntBASIC15.91■□□□□ 0.14
CD48P09326 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.91■□□□□ 0.14
CD48P09326 SERBP1P5-201ENST00000510079 1181 ntBASIC15.91■□□□□ 0.14
CD48P09326 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.91■□□□□ 0.14
CD48P09326 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.91■□□□□ 0.14
CD48P09326 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.91■□□□□ 0.14
CD48P09326 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.91■□□□□ 0.14
CD48P09326 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.91■□□□□ 0.14
CD48P09326 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.91■□□□□ 0.14
CD48P09326 AC107373.2-201ENST00000607735 490 ntBASIC15.91■□□□□ 0.14
CD48P09326 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms