Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CAPN1P07384 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.22■□□□□ 0.03
CAPN1P07384 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CAPN1P07384 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.21■□□□□ 0.03
CAPN1P07384 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.21■□□□□ 0.03
CAPN1P07384 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 AC007541.1-201ENST00000570282 1469 ntBASIC15.21■□□□□ 0.03
CAPN1P07384 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 CICP24-201ENST00000605464 2705 ntBASIC15.21■□□□□ 0.03
CAPN1P07384 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.21■□□□□ 0.03
CAPN1P07384 AL161772.1-201ENST00000610494 4412 ntBASIC15.21■□□□□ 0.03
CAPN1P07384 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CAPN1P07384 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CAPN1P07384 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 NME2P1-201ENST00000426182 414 ntBASIC15.21■□□□□ 0.03
CAPN1P07384 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.21■□□□□ 0.03
CAPN1P07384 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.21■□□□□ 0.03
CAPN1P07384 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.21■□□□□ 0.03
CAPN1P07384 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.21■□□□□ 0.03
CAPN1P07384 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.21■□□□□ 0.03
CAPN1P07384 CR383656.12-201ENST00000549567 513 ntBASIC15.21■□□□□ 0.03
CAPN1P07384 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.21■□□□□ 0.03
CAPN1P07384 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.21■□□□□ 0.03
CAPN1P07384 AC104794.3-201ENST00000566840 1248 ntBASIC15.21■□□□□ 0.03
CAPN1P07384 TP53TG3HP-202ENST00000569755 579 ntBASIC15.21■□□□□ 0.03
CAPN1P07384 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.21■□□□□ 0.03
CAPN1P07384 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.21■□□□□ 0.03
CAPN1P07384 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.21■□□□□ 0.03
CAPN1P07384 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.21■□□□□ 0.03
CAPN1P07384 AL358472.5-202ENST00000641448 1267 ntBASIC15.21■□□□□ 0.03
CAPN1P07384 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CAPN1P07384 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.21■□□□□ 0.03
CAPN1P07384 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN1P07384 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.21■□□□□ 0.02
CAPN1P07384 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CAPN1P07384 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CAPN1P07384 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CAPN1P07384 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.21■□□□□ 0.02
CAPN1P07384 AC099063.4-201ENST00000641099 1602 ntBASIC15.21■□□□□ 0.02
CAPN1P07384 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CAPN1P07384 PCDHA3-202ENST00000532566 4594 ntBASIC15.21■□□□□ 0.02
CAPN1P07384 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CAPN1P07384 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.2■□□□□ 0.02
CAPN1P07384 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.2■□□□□ 0.02
CAPN1P07384 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CAPN1P07384 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CAPN1P07384 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CAPN1P07384 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CAPN1P07384 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.2■□□□□ 0.02
CAPN1P07384 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CAPN1P07384 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.2■□□□□ 0.02
CAPN1P07384 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CAPN1P07384 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 COX5BP8-201ENST00000416911 349 ntBASIC15.2■□□□□ 0.02
CAPN1P07384 AL353779.1-201ENST00000434793 351 ntBASIC15.2■□□□□ 0.02
CAPN1P07384 SERBP1P3-201ENST00000459980 809 ntBASIC15.2■□□□□ 0.02
CAPN1P07384 RN7SL692P-201ENST00000464677 288 ntBASIC15.2■□□□□ 0.02
CAPN1P07384 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms