Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CTSDP07339 AC010327.5-201ENST00000586923 3061 ntBASIC12.82□□□□□ -0.36
CTSDP07339 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CTSDP07339 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.82□□□□□ -0.36
CTSDP07339 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.82□□□□□ -0.36
CTSDP07339 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CTSDP07339 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.82□□□□□ -0.36
CTSDP07339 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.82□□□□□ -0.36
CTSDP07339 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.82□□□□□ -0.36
CTSDP07339 IGHV3-22-201ENST00000520721 359 ntBASIC12.82□□□□□ -0.36
CTSDP07339 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.82□□□□□ -0.36
CTSDP07339 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.82□□□□□ -0.36
CTSDP07339 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.82□□□□□ -0.36
CTSDP07339 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.82□□□□□ -0.36
CTSDP07339 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.82□□□□□ -0.36
CTSDP07339 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.82□□□□□ -0.36
CTSDP07339 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.82□□□□□ -0.36
CTSDP07339 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.82□□□□□ -0.36
CTSDP07339 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
CTSDP07339 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CTSDP07339 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.82□□□□□ -0.36
CTSDP07339 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.82□□□□□ -0.36
CTSDP07339 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.82□□□□□ -0.36
CTSDP07339 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CTSDP07339 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTSDP07339 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CTSDP07339 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CTSDP07339 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CTSDP07339 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.81□□□□□ -0.36
CTSDP07339 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CTSDP07339 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.81□□□□□ -0.36
CTSDP07339 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
CTSDP07339 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CTSDP07339 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CTSDP07339 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 AL590627.1-203ENST00000421194 1026 ntBASIC12.81□□□□□ -0.36
CTSDP07339 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.81□□□□□ -0.36
CTSDP07339 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.81□□□□□ -0.36
CTSDP07339 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.81□□□□□ -0.36
CTSDP07339 PDPK2P-202ENST00000562415 1191 ntBASIC12.81□□□□□ -0.36
CTSDP07339 AL135744.1-201ENST00000565098 629 ntBASIC12.81□□□□□ -0.36
CTSDP07339 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.81□□□□□ -0.36
CTSDP07339 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.81□□□□□ -0.36
CTSDP07339 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.81□□□□□ -0.36
CTSDP07339 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.81□□□□□ -0.36
CTSDP07339 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 Z83851.2-201ENST00000609564 659 ntBASIC12.81□□□□□ -0.36
CTSDP07339 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.81□□□□□ -0.36
CTSDP07339 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.81□□□□□ -0.36
CTSDP07339 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CTSDP07339 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
CTSDP07339 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CTSDP07339 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CTSDP07339 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
CTSDP07339 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 AC087386.2-201ENST00000623212 4637 ntBASIC12.81□□□□□ -0.36
CTSDP07339 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.81□□□□□ -0.36
CTSDP07339 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms