Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.72■□□□□ 0.75
COL5A2P05997 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL5A2P05997 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL5A2P05997 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL5A2P05997 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.71■□□□□ 0.75
COL5A2P05997 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
COL5A2P05997 PCDH8P1-201ENST00000428983 2773 ntBASIC19.71■□□□□ 0.75
COL5A2P05997 AC010491.1-201ENST00000563101 2797 ntBASIC19.71■□□□□ 0.75
COL5A2P05997 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL5A2P05997 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL5A2P05997 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL5A2P05997 MIR1227-201ENST00000408484 88 ntBASIC19.71■□□□□ 0.75
COL5A2P05997 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
COL5A2P05997 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC19.71■□□□□ 0.75
COL5A2P05997 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC19.71■□□□□ 0.75
COL5A2P05997 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC19.71■□□□□ 0.75
COL5A2P05997 BUD31-205ENST00000456893 512 ntTSL 5 BASIC19.71■□□□□ 0.75
COL5A2P05997 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC19.71■□□□□ 0.75
COL5A2P05997 ORAOV1P1-201ENST00000503108 395 ntBASIC19.71■□□□□ 0.75
COL5A2P05997 AC131206.1-201ENST00000538078 1211 ntBASIC19.71■□□□□ 0.75
COL5A2P05997 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC19.71■□□□□ 0.75
COL5A2P05997 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
COL5A2P05997 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
COL5A2P05997 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC19.71■□□□□ 0.75
COL5A2P05997 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.71■□□□□ 0.75
COL5A2P05997 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL5A2P05997 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC19.71■□□□□ 0.75
COL5A2P05997 ZBED1P1-201ENST00000502364 1930 ntBASIC19.71■□□□□ 0.75
COL5A2P05997 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.71■□□□□ 0.75
COL5A2P05997 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL5A2P05997 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL5A2P05997 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL5A2P05997 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL5A2P05997 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.7■□□□□ 0.74
COL5A2P05997 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.7■□□□□ 0.74
COL5A2P05997 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.7■□□□□ 0.74
COL5A2P05997 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL5A2P05997 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COL5A2P05997 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
COL5A2P05997 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL5A2P05997 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL5A2P05997 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC19.7■□□□□ 0.74
COL5A2P05997 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL5A2P05997 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL5A2P05997 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL5A2P05997 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC19.7■□□□□ 0.74
COL5A2P05997 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC19.7■□□□□ 0.74
COL5A2P05997 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC19.7■□□□□ 0.74
COL5A2P05997 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COL5A2P05997 FTH1P22-201ENST00000456305 520 ntBASIC19.7■□□□□ 0.74
COL5A2P05997 AC093752.3-201ENST00000567343 901 ntBASIC19.7■□□□□ 0.74
COL5A2P05997 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL5A2P05997 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL5A2P05997 AC027601.3-201ENST00000622907 509 ntBASIC19.7■□□□□ 0.74
COL5A2P05997 AL132780.4-201ENST00000624870 1135 ntBASIC19.7■□□□□ 0.74
COL5A2P05997 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC19.7■□□□□ 0.74
COL5A2P05997 AC092299.1-201ENST00000632679 757 ntBASIC19.7■□□□□ 0.74
COL5A2P05997 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL5A2P05997 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL5A2P05997 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COL5A2P05997 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC19.7■□□□□ 0.74
COL5A2P05997 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL5A2P05997 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL5A2P05997 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL5A2P05997 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
COL5A2P05997 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC19.7■□□□□ 0.74
COL5A2P05997 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
COL5A2P05997 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
COL5A2P05997 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
COL5A2P05997 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
COL5A2P05997 AL139384.1-201ENST00000612143 3047 ntBASIC19.69■□□□□ 0.74
COL5A2P05997 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COL5A2P05997 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL5A2P05997 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL5A2P05997 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
COL5A2P05997 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC19.69■□□□□ 0.74
COL5A2P05997 RN7SL81P-201ENST00000493781 261 ntBASIC19.69■□□□□ 0.74
COL5A2P05997 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL5A2P05997 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC19.69■□□□□ 0.74
COL5A2P05997 POLD4-208ENST00000532830 904 ntTSL 3 BASIC19.69■□□□□ 0.74
COL5A2P05997 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL5A2P05997 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.69■□□□□ 0.74
COL5A2P05997 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL5A2P05997 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL5A2P05997 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL5A2P05997 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC19.69■□□□□ 0.74
COL5A2P05997 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL5A2P05997 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC19.69■□□□□ 0.74
COL5A2P05997 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL5A2P05997 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL5A2P05997 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.69■□□□□ 0.74
COL5A2P05997 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL5A2P05997 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL5A2P05997 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL5A2P05997 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.68■□□□□ 0.74
COL5A2P05997 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC19.68■□□□□ 0.74
COL5A2P05997 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.68■□□□□ 0.74
COL5A2P05997 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL5A2P05997 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL5A2P05997 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms