Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
VTNP04004 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
VTNP04004 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VTNP04004 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
VTNP04004 AC020907.1-201ENST00000616460 1350 ntBASIC16.76■□□□□ 0.27
VTNP04004 AC020658.6-201ENST00000623564 1870 ntBASIC16.76■□□□□ 0.27
VTNP04004 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.75■□□□□ 0.27
VTNP04004 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VTNP04004 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.75■□□□□ 0.27
VTNP04004 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 AC007969.1-201ENST00000433675 447 ntBASIC16.75■□□□□ 0.27
VTNP04004 FAM8A4P-201ENST00000435433 1213 ntBASIC16.75■□□□□ 0.27
VTNP04004 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VTNP04004 ZNF767P-206ENST00000513792 565 ntBASIC16.75■□□□□ 0.27
VTNP04004 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.75■□□□□ 0.27
VTNP04004 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.75■□□□□ 0.27
VTNP04004 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.75■□□□□ 0.27
VTNP04004 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
VTNP04004 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.75■□□□□ 0.27
VTNP04004 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.75■□□□□ 0.27
VTNP04004 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.75■□□□□ 0.27
VTNP04004 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VTNP04004 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTNP04004 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.75■□□□□ 0.27
VTNP04004 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VTNP04004 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VTNP04004 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VTNP04004 REXO1L4P-201ENST00000605109 1937 ntBASIC16.74■□□□□ 0.27
VTNP04004 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VTNP04004 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTNP04004 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
VTNP04004 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VTNP04004 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTNP04004 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VTNP04004 AC087481.3-201ENST00000602886 1894 ntBASIC16.74■□□□□ 0.27
VTNP04004 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTNP04004 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VTNP04004 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTNP04004 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VTNP04004 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTNP04004 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.74■□□□□ 0.27
VTNP04004 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.74■□□□□ 0.27
VTNP04004 BTBD6P1-201ENST00000412176 1267 ntBASIC16.74■□□□□ 0.27
VTNP04004 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.74■□□□□ 0.27
VTNP04004 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.74■□□□□ 0.27
VTNP04004 MTX1P1-201ENST00000440904 838 ntBASIC16.74■□□□□ 0.27
VTNP04004 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.74■□□□□ 0.27
VTNP04004 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.74■□□□□ 0.27
VTNP04004 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.74■□□□□ 0.27
VTNP04004 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.74■□□□□ 0.27
VTNP04004 C2orf69P2-201ENST00000562032 1123 ntBASIC16.74■□□□□ 0.27
VTNP04004 EEF1DP1-201ENST00000585891 896 ntBASIC16.74■□□□□ 0.27
VTNP04004 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
VTNP04004 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.74■□□□□ 0.27
VTNP04004 OR10B1P-201ENST00000601666 907 ntBASIC16.74■□□□□ 0.27
VTNP04004 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VTNP04004 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VTNP04004 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTNP04004 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTNP04004 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTNP04004 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.74■□□□□ 0.27
VTNP04004 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.74■□□□□ 0.27
VTNP04004 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VTNP04004 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
VTNP04004 AL360270.3-201ENST00000609118 1348 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms