Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.7□□□□□ -0.22
APOC1P02654 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.7□□□□□ -0.22
APOC1P02654 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 AC092865.5-201ENST00000545435 363 ntBASIC13.7□□□□□ -0.22
APOC1P02654 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.7□□□□□ -0.22
APOC1P02654 MIR4453-201ENST00000584019 89 ntBASIC13.7□□□□□ -0.22
APOC1P02654 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
APOC1P02654 PTENP1-202ENST00000532280 3996 ntBASIC13.7□□□□□ -0.22
APOC1P02654 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
APOC1P02654 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
APOC1P02654 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
APOC1P02654 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.7□□□□□ -0.22
APOC1P02654 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.7□□□□□ -0.22
APOC1P02654 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.7□□□□□ -0.22
APOC1P02654 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
APOC1P02654 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.7□□□□□ -0.22
APOC1P02654 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.7□□□□□ -0.22
APOC1P02654 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
APOC1P02654 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC1P02654 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.69□□□□□ -0.22
APOC1P02654 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.69□□□□□ -0.22
APOC1P02654 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.69□□□□□ -0.22
APOC1P02654 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.69□□□□□ -0.22
APOC1P02654 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 AC148477.4-201ENST00000613430 1793 ntBASIC13.69□□□□□ -0.22
APOC1P02654 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
APOC1P02654 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.69□□□□□ -0.22
APOC1P02654 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.69□□□□□ -0.22
APOC1P02654 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
APOC1P02654 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
APOC1P02654 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.69□□□□□ -0.22
APOC1P02654 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
APOC1P02654 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.69□□□□□ -0.22
APOC1P02654 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.69□□□□□ -0.22
APOC1P02654 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
APOC1P02654 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
APOC1P02654 AC007191.1-201ENST00000623179 2995 ntBASIC13.69□□□□□ -0.22
APOC1P02654 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
APOC1P02654 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.69□□□□□ -0.22
APOC1P02654 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.69□□□□□ -0.22
APOC1P02654 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC1P02654 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.69□□□□□ -0.22
APOC1P02654 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
APOC1P02654 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC1P02654 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
APOC1P02654 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC1P02654 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC1P02654 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.68□□□□□ -0.22
APOC1P02654 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
APOC1P02654 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
APOC1P02654 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
APOC1P02654 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 HIST3H2BA-201ENST00000436555 524 ntBASIC13.68□□□□□ -0.22
APOC1P02654 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms