Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.2■□□□□ 0.5
COL1A1P02452 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.2■□□□□ 0.5
COL1A1P02452 NKAIN1P1-201ENST00000435754 582 ntBASIC18.2■□□□□ 0.5
COL1A1P02452 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.2■□□□□ 0.5
COL1A1P02452 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.2■□□□□ 0.5
COL1A1P02452 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL1A1P02452 RN7SL720P-201ENST00000488178 304 ntBASIC18.2■□□□□ 0.5
COL1A1P02452 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.2■□□□□ 0.5
COL1A1P02452 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.2■□□□□ 0.5
COL1A1P02452 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
COL1A1P02452 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL1A1P02452 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.2■□□□□ 0.5
COL1A1P02452 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL1A1P02452 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.2■□□□□ 0.5
COL1A1P02452 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL1A1P02452 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
COL1A1P02452 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL1A1P02452 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL1A1P02452 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL1A1P02452 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL1A1P02452 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL1A1P02452 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.2■□□□□ 0.5
COL1A1P02452 AC003102.2-201ENST00000589195 1469 ntBASIC18.2■□□□□ 0.5
COL1A1P02452 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.2■□□□□ 0.5
COL1A1P02452 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL1A1P02452 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL1A1P02452 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.2■□□□□ 0.5
COL1A1P02452 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
COL1A1P02452 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL1A1P02452 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.2■□□□□ 0.5
COL1A1P02452 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL1A1P02452 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
COL1A1P02452 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC18.2■□□□□ 0.5
COL1A1P02452 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.2■□□□□ 0.5
COL1A1P02452 CYP46A4P-201ENST00000414953 267 ntBASIC18.2■□□□□ 0.5
COL1A1P02452 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.2■□□□□ 0.5
COL1A1P02452 SPTLC1P5-201ENST00000450718 252 ntBASIC18.2■□□□□ 0.5
COL1A1P02452 AC022217.1-201ENST00000521069 738 ntBASIC18.2■□□□□ 0.5
COL1A1P02452 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.2■□□□□ 0.5
COL1A1P02452 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
COL1A1P02452 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.2■□□□□ 0.5
COL1A1P02452 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.2■□□□□ 0.5
COL1A1P02452 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
COL1A1P02452 CU633904.3-201ENST00000624042 1029 ntBASIC18.2■□□□□ 0.5
COL1A1P02452 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.2■□□□□ 0.5
COL1A1P02452 AC128714.1-201ENST00000637035 887 ntBASIC18.2■□□□□ 0.5
COL1A1P02452 AC002472.3-201ENST00000640124 621 ntBASIC18.2■□□□□ 0.5
COL1A1P02452 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.2■□□□□ 0.5
COL1A1P02452 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
COL1A1P02452 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.19■□□□□ 0.5
COL1A1P02452 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.19■□□□□ 0.5
COL1A1P02452 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
COL1A1P02452 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
COL1A1P02452 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.19■□□□□ 0.5
COL1A1P02452 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.19■□□□□ 0.5
COL1A1P02452 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
COL1A1P02452 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
COL1A1P02452 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 MAGEA5-201ENST00000446757 942 ntBASIC18.19■□□□□ 0.5
COL1A1P02452 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.19■□□□□ 0.5
COL1A1P02452 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC18.19■□□□□ 0.5
COL1A1P02452 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.19■□□□□ 0.5
COL1A1P02452 MIR4722-201ENST00000578292 60 ntBASIC18.19■□□□□ 0.5
COL1A1P02452 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC18.19■□□□□ 0.5
COL1A1P02452 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.19■□□□□ 0.5
COL1A1P02452 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.19■□□□□ 0.5
COL1A1P02452 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.19■□□□□ 0.5
COL1A1P02452 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.19■□□□□ 0.5
COL1A1P02452 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL1A1P02452 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COL1A1P02452 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL1A1P02452 AC008741.2-201ENST00000612792 3115 ntBASIC18.18■□□□□ 0.5
COL1A1P02452 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL1A1P02452 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL1A1P02452 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL1A1P02452 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL1A1P02452 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL1A1P02452 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL1A1P02452 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.18■□□□□ 0.5
COL1A1P02452 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.18■□□□□ 0.5
COL1A1P02452 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL1A1P02452 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL1A1P02452 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL1A1P02452 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.18■□□□□ 0.5
COL1A1P02452 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms