Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.25■□□□□ 0.35
ALDH1A1P00352 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 AL583805.1-201ENST00000391389 531 ntBASIC17.25■□□□□ 0.35
ALDH1A1P00352 BCAS2P2-201ENST00000425064 674 ntBASIC17.25■□□□□ 0.35
ALDH1A1P00352 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.25■□□□□ 0.35
ALDH1A1P00352 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC17.25■□□□□ 0.35
ALDH1A1P00352 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.25■□□□□ 0.35
ALDH1A1P00352 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.25■□□□□ 0.35
ALDH1A1P00352 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ALDH1A1P00352 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.25■□□□□ 0.35
ALDH1A1P00352 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.25■□□□□ 0.35
ALDH1A1P00352 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 AC105137.3-201ENST00000617588 984 ntBASIC17.25■□□□□ 0.35
ALDH1A1P00352 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC17.25■□□□□ 0.35
ALDH1A1P00352 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ALDH1A1P00352 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.25■□□□□ 0.35
ALDH1A1P00352 AC009093.2-202ENST00000620513 2079 ntBASIC17.25■□□□□ 0.35
ALDH1A1P00352 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ALDH1A1P00352 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ALDH1A1P00352 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
ALDH1A1P00352 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.25■□□□□ 0.35
ALDH1A1P00352 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ALDH1A1P00352 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.25■□□□□ 0.35
ALDH1A1P00352 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALDH1A1P00352 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALDH1A1P00352 KRT18P9-201ENST00000604826 1300 ntBASIC17.24■□□□□ 0.35
ALDH1A1P00352 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALDH1A1P00352 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
ALDH1A1P00352 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
ALDH1A1P00352 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
ALDH1A1P00352 NFIC-211ENST00000641145 8399 ntBASIC17.24■□□□□ 0.35
ALDH1A1P00352 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
ALDH1A1P00352 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALDH1A1P00352 REXO1L5P-201ENST00000622260 2098 ntBASIC17.24■□□□□ 0.35
ALDH1A1P00352 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALDH1A1P00352 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALDH1A1P00352 BAK1P1-201ENST00000317045 636 ntBASIC17.24■□□□□ 0.35
ALDH1A1P00352 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ALDH1A1P00352 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALDH1A1P00352 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.24■□□□□ 0.35
ALDH1A1P00352 AC092638.2-201ENST00000441105 947 ntBASIC17.24■□□□□ 0.35
ALDH1A1P00352 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC17.24■□□□□ 0.35
ALDH1A1P00352 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALDH1A1P00352 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.24■□□□□ 0.35
ALDH1A1P00352 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC17.24■□□□□ 0.35
ALDH1A1P00352 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.24■□□□□ 0.35
ALDH1A1P00352 MIR6720-201ENST00000611664 98 ntBASIC17.24■□□□□ 0.35
ALDH1A1P00352 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALDH1A1P00352 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALDH1A1P00352 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ALDH1A1P00352 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALDH1A1P00352 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALDH1A1P00352 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ALDH1A1P00352 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.24■□□□□ 0.35
ALDH1A1P00352 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALDH1A1P00352 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALDH1A1P00352 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.24■□□□□ 0.35
ALDH1A1P00352 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.24■□□□□ 0.35
ALDH1A1P00352 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALDH1A1P00352 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ALDH1A1P00352 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 AC124067.4-201ENST00000519691 2379 ntBASIC17.23■□□□□ 0.35
ALDH1A1P00352 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 INE2-201ENST00000630399 1874 ntBASIC17.23■□□□□ 0.35
ALDH1A1P00352 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.23■□□□□ 0.35
ALDH1A1P00352 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
ALDH1A1P00352 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.23■□□□□ 0.35
ALDH1A1P00352 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC17.23■□□□□ 0.35
ALDH1A1P00352 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.23■□□□□ 0.35
ALDH1A1P00352 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.23■□□□□ 0.35
ALDH1A1P00352 ALG1L13P-202ENST00000519320 584 ntBASIC17.23■□□□□ 0.35
ALDH1A1P00352 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ALDH1A1P00352 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
ALDH1A1P00352 NUDT4P2-201ENST00000578341 546 ntBASIC17.23■□□□□ 0.35
ALDH1A1P00352 RN7SL596P-201ENST00000582123 288 ntBASIC17.23■□□□□ 0.35
ALDH1A1P00352 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms