Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.29■□□□□ 0.2
ZBED1O96006 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
ZBED1O96006 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.29■□□□□ 0.2
ZBED1O96006 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.29■□□□□ 0.2
ZBED1O96006 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ZBED1O96006 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.29■□□□□ 0.2
ZBED1O96006 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
ZBED1O96006 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.28■□□□□ 0.2
ZBED1O96006 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.28■□□□□ 0.2
ZBED1O96006 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.28■□□□□ 0.2
ZBED1O96006 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ZBED1O96006 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.28■□□□□ 0.2
ZBED1O96006 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.28■□□□□ 0.2
ZBED1O96006 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.28■□□□□ 0.2
ZBED1O96006 AC011495.1-201ENST00000498085 584 ntBASIC16.28■□□□□ 0.2
ZBED1O96006 GAPDHP40-201ENST00000505218 1006 ntBASIC16.28■□□□□ 0.2
ZBED1O96006 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.28■□□□□ 0.2
ZBED1O96006 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.28■□□□□ 0.2
ZBED1O96006 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 AC124283.3-201ENST00000570869 594 ntBASIC16.28■□□□□ 0.2
ZBED1O96006 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.28■□□□□ 0.2
ZBED1O96006 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.28■□□□□ 0.2
ZBED1O96006 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ZBED1O96006 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.28■□□□□ 0.2
ZBED1O96006 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.28■□□□□ 0.2
ZBED1O96006 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.28■□□□□ 0.2
ZBED1O96006 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ZBED1O96006 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.28■□□□□ 0.2
ZBED1O96006 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZBED1O96006 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.28■□□□□ 0.2
ZBED1O96006 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ZBED1O96006 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.27■□□□□ 0.2
ZBED1O96006 C18orf15-201ENST00000623680 2534 ntBASIC16.27■□□□□ 0.2
ZBED1O96006 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZBED1O96006 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
ZBED1O96006 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZBED1O96006 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.27■□□□□ 0.2
ZBED1O96006 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZBED1O96006 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZBED1O96006 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZBED1O96006 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.27■□□□□ 0.2
ZBED1O96006 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZBED1O96006 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZBED1O96006 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.27■□□□□ 0.2
ZBED1O96006 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZBED1O96006 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ZBED1O96006 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.27■□□□□ 0.2
ZBED1O96006 C1QBPP1-201ENST00000400117 770 ntBASIC16.27■□□□□ 0.2
ZBED1O96006 SOCS2P1-201ENST00000417727 557 ntBASIC16.27■□□□□ 0.2
ZBED1O96006 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.27■□□□□ 0.2
ZBED1O96006 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZBED1O96006 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.27■□□□□ 0.2
ZBED1O96006 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.27■□□□□ 0.2
ZBED1O96006 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.27■□□□□ 0.2
ZBED1O96006 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.27■□□□□ 0.2
ZBED1O96006 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.27■□□□□ 0.2
ZBED1O96006 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ZBED1O96006 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ZBED1O96006 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ZBED1O96006 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.27■□□□□ 0.2
ZBED1O96006 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ZBED1O96006 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.27■□□□□ 0.2
ZBED1O96006 AC107373.2-201ENST00000607735 490 ntBASIC16.27■□□□□ 0.2
ZBED1O96006 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.27■□□□□ 0.2
ZBED1O96006 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZBED1O96006 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZBED1O96006 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ZBED1O96006 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZBED1O96006 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZBED1O96006 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZBED1O96006 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ZBED1O96006 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
ZBED1O96006 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms