Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE6O95741 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CPNE6O95741 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE6O95741 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.14■□□□□ 0.01
CPNE6O95741 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CPNE6O95741 AC007191.1-201ENST00000623179 2995 ntBASIC15.14■□□□□ 0.01
CPNE6O95741 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CPNE6O95741 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.14■□□□□ 0.01
CPNE6O95741 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.14■□□□□ 0.01
CPNE6O95741 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CPNE6O95741 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CPNE6O95741 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.13■□□□□ 0.01
CPNE6O95741 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.13■□□□□ 0.01
CPNE6O95741 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.13■□□□□ 0.01
CPNE6O95741 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE6O95741 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE6O95741 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CPNE6O95741 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CPNE6O95741 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE6O95741 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 AC005229.1-201ENST00000392885 409 ntBASIC15.13■□□□□ 0.01
CPNE6O95741 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
CPNE6O95741 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CPNE6O95741 KRT18P43-201ENST00000469825 1281 ntBASIC15.13■□□□□ 0.01
CPNE6O95741 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.13■□□□□ 0.01
CPNE6O95741 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.13■□□□□ 0.01
CPNE6O95741 AC009486.1-201ENST00000569860 813 ntBASIC15.13■□□□□ 0.01
CPNE6O95741 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.13■□□□□ 0.01
CPNE6O95741 AC097359.3-201ENST00000603982 1210 ntBASIC15.13■□□□□ 0.01
CPNE6O95741 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.13■□□□□ 0.01
CPNE6O95741 AL607033.1-201ENST00000623900 1599 ntBASIC15.13■□□□□ 0.01
CPNE6O95741 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CPNE6O95741 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.13■□□□□ 0.01
CPNE6O95741 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE6O95741 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.13■□□□□ 0.01
CPNE6O95741 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE6O95741 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
CPNE6O95741 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE6O95741 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE6O95741 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE6O95741 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CPNE6O95741 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE6O95741 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE6O95741 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE6O95741 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE6O95741 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE6O95741 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE6O95741 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE6O95741 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE6O95741 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CPNE6O95741 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE6O95741 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE6O95741 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CPNE6O95741 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE6O95741 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE6O95741 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE6O95741 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE6O95741 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE6O95741 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE6O95741 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE6O95741 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CPNE6O95741 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE6O95741 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CPNE6O95741 KLF2P4-201ENST00000451959 1225 ntBASIC15.12■□□□□ 0.01
CPNE6O95741 VDAC1P7-201ENST00000462417 847 ntBASIC15.12■□□□□ 0.01
CPNE6O95741 AC068587.3-201ENST00000526613 355 ntBASIC15.12■□□□□ 0.01
CPNE6O95741 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms