Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLSTN1O94985 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLSTN1O94985 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
CLSTN1O94985 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC17.14■□□□□ 0.33
CLSTN1O94985 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLSTN1O94985 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CLSTN1O94985 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLSTN1O94985 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.14■□□□□ 0.33
CLSTN1O94985 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.14■□□□□ 0.33
CLSTN1O94985 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.14■□□□□ 0.33
CLSTN1O94985 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.14■□□□□ 0.33
CLSTN1O94985 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.14■□□□□ 0.33
CLSTN1O94985 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.14■□□□□ 0.33
CLSTN1O94985 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.14■□□□□ 0.33
CLSTN1O94985 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.14■□□□□ 0.33
CLSTN1O94985 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.14■□□□□ 0.33
CLSTN1O94985 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.14■□□□□ 0.33
CLSTN1O94985 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLSTN1O94985 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.14■□□□□ 0.33
CLSTN1O94985 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.14■□□□□ 0.33
CLSTN1O94985 AL033527.5-202ENST00000641632 1098 ntBASIC17.14■□□□□ 0.33
CLSTN1O94985 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLSTN1O94985 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.14■□□□□ 0.33
CLSTN1O94985 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLSTN1O94985 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.14■□□□□ 0.33
CLSTN1O94985 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLSTN1O94985 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLSTN1O94985 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLSTN1O94985 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLSTN1O94985 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.14■□□□□ 0.33
CLSTN1O94985 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLSTN1O94985 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.14■□□□□ 0.33
CLSTN1O94985 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLSTN1O94985 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.14■□□□□ 0.33
CLSTN1O94985 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.14■□□□□ 0.33
CLSTN1O94985 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC17.14■□□□□ 0.33
CLSTN1O94985 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
CLSTN1O94985 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLSTN1O94985 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.13■□□□□ 0.33
CLSTN1O94985 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.13■□□□□ 0.33
CLSTN1O94985 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.13■□□□□ 0.33
CLSTN1O94985 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CLSTN1O94985 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.13■□□□□ 0.33
CLSTN1O94985 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 PHKG1P2-201ENST00000457537 863 ntBASIC17.13■□□□□ 0.33
CLSTN1O94985 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.13■□□□□ 0.33
CLSTN1O94985 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CLSTN1O94985 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.13■□□□□ 0.33
CLSTN1O94985 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.13■□□□□ 0.33
CLSTN1O94985 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLSTN1O94985 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.13■□□□□ 0.33
CLSTN1O94985 AC020658.6-201ENST00000623564 1870 ntBASIC17.13■□□□□ 0.33
CLSTN1O94985 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 ADAMTS7P1-201ENST00000613213 4793 ntBASIC17.13■□□□□ 0.33
CLSTN1O94985 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.13■□□□□ 0.33
CLSTN1O94985 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CLSTN1O94985 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.13■□□□□ 0.33
CLSTN1O94985 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLSTN1O94985 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.12■□□□□ 0.33
CLSTN1O94985 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLSTN1O94985 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CLSTN1O94985 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLSTN1O94985 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.12■□□□□ 0.33
CLSTN1O94985 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLSTN1O94985 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLSTN1O94985 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLSTN1O94985 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CLSTN1O94985 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLSTN1O94985 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.12■□□□□ 0.33
CLSTN1O94985 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CLSTN1O94985 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.12■□□□□ 0.33
CLSTN1O94985 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.12■□□□□ 0.33
CLSTN1O94985 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.12■□□□□ 0.33
CLSTN1O94985 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLSTN1O94985 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLSTN1O94985 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLSTN1O94985 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLSTN1O94985 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.12■□□□□ 0.33
CLSTN1O94985 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLSTN1O94985 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms