Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
NDUFS3O75489 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
NDUFS3O75489 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.37■□□□□ 0.05
NDUFS3O75489 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NDUFS3O75489 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.37■□□□□ 0.05
NDUFS3O75489 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.37■□□□□ 0.05
NDUFS3O75489 INGX-202ENST00000489074 768 ntBASIC15.37■□□□□ 0.05
NDUFS3O75489 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.37■□□□□ 0.05
NDUFS3O75489 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.37■□□□□ 0.05
NDUFS3O75489 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
NDUFS3O75489 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.37■□□□□ 0.05
NDUFS3O75489 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.37■□□□□ 0.05
NDUFS3O75489 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.37■□□□□ 0.05
NDUFS3O75489 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.37■□□□□ 0.05
NDUFS3O75489 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.37■□□□□ 0.05
NDUFS3O75489 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.37■□□□□ 0.05
NDUFS3O75489 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
NDUFS3O75489 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.37■□□□□ 0.05
NDUFS3O75489 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.37■□□□□ 0.05
NDUFS3O75489 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
NDUFS3O75489 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.37■□□□□ 0.05
NDUFS3O75489 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
NDUFS3O75489 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
NDUFS3O75489 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NDUFS3O75489 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.37■□□□□ 0.05
NDUFS3O75489 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.37■□□□□ 0.05
NDUFS3O75489 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.37■□□□□ 0.05
NDUFS3O75489 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NDUFS3O75489 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 ZBED1P1-201ENST00000502364 1930 ntBASIC15.37■□□□□ 0.05
NDUFS3O75489 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
NDUFS3O75489 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFS3O75489 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NDUFS3O75489 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NDUFS3O75489 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.36■□□□□ 0.05
NDUFS3O75489 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.36■□□□□ 0.05
NDUFS3O75489 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NDUFS3O75489 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.36■□□□□ 0.05
NDUFS3O75489 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 MRPS18AP1-201ENST00000414458 589 ntBASIC15.36■□□□□ 0.05
NDUFS3O75489 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.36■□□□□ 0.05
NDUFS3O75489 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 DOC2GP-202ENST00000514950 1163 ntBASIC15.36■□□□□ 0.05
NDUFS3O75489 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.36■□□□□ 0.05
NDUFS3O75489 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.36■□□□□ 0.05
NDUFS3O75489 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.36■□□□□ 0.05
NDUFS3O75489 TPRX2P-201ENST00000535362 881 ntBASIC15.36■□□□□ 0.05
NDUFS3O75489 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
NDUFS3O75489 AC036164.1-201ENST00000570544 333 ntBASIC15.36■□□□□ 0.05
NDUFS3O75489 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.36■□□□□ 0.05
NDUFS3O75489 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.36■□□□□ 0.05
NDUFS3O75489 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
NDUFS3O75489 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.36■□□□□ 0.05
NDUFS3O75489 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NDUFS3O75489 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NDUFS3O75489 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.36■□□□□ 0.05
NDUFS3O75489 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFS3O75489 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
NDUFS3O75489 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
NDUFS3O75489 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NDUFS3O75489 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms