Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
LRCH4O75427 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LRCH4O75427 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LRCH4O75427 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.98■□□□□ 0.15
LRCH4O75427 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.98■□□□□ 0.15
LRCH4O75427 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.98■□□□□ 0.15
LRCH4O75427 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.98■□□□□ 0.15
LRCH4O75427 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.98■□□□□ 0.15
LRCH4O75427 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
LRCH4O75427 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.98■□□□□ 0.15
LRCH4O75427 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
LRCH4O75427 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LRCH4O75427 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 LILRP1-201ENST00000444199 1370 ntBASIC15.98■□□□□ 0.15
LRCH4O75427 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.98■□□□□ 0.15
LRCH4O75427 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LRCH4O75427 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LRCH4O75427 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
LRCH4O75427 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.97■□□□□ 0.15
LRCH4O75427 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.97■□□□□ 0.15
LRCH4O75427 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH4O75427 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH4O75427 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.97■□□□□ 0.15
LRCH4O75427 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.97■□□□□ 0.15
LRCH4O75427 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH4O75427 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LRCH4O75427 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.97■□□□□ 0.15
LRCH4O75427 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
LRCH4O75427 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.97■□□□□ 0.15
LRCH4O75427 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH4O75427 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.97■□□□□ 0.15
LRCH4O75427 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.97■□□□□ 0.15
LRCH4O75427 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 TSPY16P-201ENST00000449843 468 ntBASIC15.97■□□□□ 0.15
LRCH4O75427 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.97■□□□□ 0.15
LRCH4O75427 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH4O75427 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.97■□□□□ 0.15
LRCH4O75427 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.97■□□□□ 0.15
LRCH4O75427 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
LRCH4O75427 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LRCH4O75427 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH4O75427 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH4O75427 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH4O75427 INTS4P2-202ENST00000614726 2019 ntBASIC15.97■□□□□ 0.15
LRCH4O75427 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH4O75427 AL158070.2-201ENST00000623713 1621 ntBASIC15.97■□□□□ 0.15
LRCH4O75427 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LRCH4O75427 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LRCH4O75427 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH4O75427 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRCH4O75427 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH4O75427 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH4O75427 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH4O75427 REXO1L5P-201ENST00000622260 2098 ntBASIC15.96■□□□□ 0.15
LRCH4O75427 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRCH4O75427 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH4O75427 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.96■□□□□ 0.15
LRCH4O75427 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH4O75427 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH4O75427 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRCH4O75427 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH4O75427 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.96■□□□□ 0.15
LRCH4O75427 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.96■□□□□ 0.15
LRCH4O75427 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH4O75427 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LRCH4O75427 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH4O75427 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms