Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.71□□□□□ -0.21
PFDN1O60925 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
PFDN1O60925 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.71□□□□□ -0.21
PFDN1O60925 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.71□□□□□ -0.21
PFDN1O60925 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
PFDN1O60925 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
PFDN1O60925 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
PFDN1O60925 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
PFDN1O60925 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
PFDN1O60925 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PFDN1O60925 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
PFDN1O60925 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PFDN1O60925 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
PFDN1O60925 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.71□□□□□ -0.22
PFDN1O60925 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
PFDN1O60925 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PFDN1O60925 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PFDN1O60925 AC010460.3-201ENST00000511359 1579 ntBASIC13.71□□□□□ -0.22
PFDN1O60925 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.7□□□□□ -0.22
PFDN1O60925 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PFDN1O60925 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
PFDN1O60925 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.7□□□□□ -0.22
PFDN1O60925 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.7□□□□□ -0.22
PFDN1O60925 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PFDN1O60925 AP000437.1-201ENST00000624057 2085 ntBASIC13.7□□□□□ -0.22
PFDN1O60925 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PFDN1O60925 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PFDN1O60925 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PFDN1O60925 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.7□□□□□ -0.22
PFDN1O60925 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.7□□□□□ -0.22
PFDN1O60925 AC083880.1-201ENST00000608266 535 ntBASIC13.7□□□□□ -0.22
PFDN1O60925 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.7□□□□□ -0.22
PFDN1O60925 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.7□□□□□ -0.22
PFDN1O60925 BX537318.2-201ENST00000624893 4162 ntBASIC13.7□□□□□ -0.22
PFDN1O60925 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 AC110048.1-201ENST00000604293 2157 ntBASIC13.7□□□□□ -0.22
PFDN1O60925 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
PFDN1O60925 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.7□□□□□ -0.22
PFDN1O60925 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PFDN1O60925 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PFDN1O60925 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PFDN1O60925 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.7□□□□□ -0.22
PFDN1O60925 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC13.7□□□□□ -0.22
PFDN1O60925 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.7□□□□□ -0.22
PFDN1O60925 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.7□□□□□ -0.22
PFDN1O60925 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PFDN1O60925 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.69□□□□□ -0.22
PFDN1O60925 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC13.69□□□□□ -0.22
PFDN1O60925 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.69□□□□□ -0.22
PFDN1O60925 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC13.69□□□□□ -0.22
PFDN1O60925 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.69□□□□□ -0.22
PFDN1O60925 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.69□□□□□ -0.22
PFDN1O60925 NBN-203ENST00000409330 4523 ntTSL 5 BASIC13.69□□□□□ -0.22
PFDN1O60925 AC055811.4-201ENST00000624039 1754 ntBASIC13.69□□□□□ -0.22
PFDN1O60925 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PFDN1O60925 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
PFDN1O60925 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PFDN1O60925 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.69□□□□□ -0.22
PFDN1O60925 KRT17P3-201ENST00000420566 1262 ntBASIC13.69□□□□□ -0.22
PFDN1O60925 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.69□□□□□ -0.22
PFDN1O60925 HLA-F-220ENST00000434407 884 ntBASIC13.69□□□□□ -0.22
PFDN1O60925 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.69□□□□□ -0.22
PFDN1O60925 AC006970.2-201ENST00000450065 779 ntBASIC13.69□□□□□ -0.22
PFDN1O60925 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.69□□□□□ -0.22
PFDN1O60925 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC13.69□□□□□ -0.22
PFDN1O60925 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms