Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPHN1O60890 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
OPHN1O60890 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.15■□□□□ 0.18
OPHN1O60890 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPHN1O60890 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
OPHN1O60890 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
OPHN1O60890 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.15■□□□□ 0.18
OPHN1O60890 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
OPHN1O60890 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPHN1O60890 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPHN1O60890 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPHN1O60890 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPHN1O60890 AC112693.3-201ENST00000624819 1983 ntBASIC16.15■□□□□ 0.18
OPHN1O60890 AC138035.3-201ENST00000622706 2791 ntBASIC16.15■□□□□ 0.18
OPHN1O60890 AC006058.4-201ENST00000624016 1670 ntBASIC16.14■□□□□ 0.18
OPHN1O60890 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
OPHN1O60890 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.14■□□□□ 0.18
OPHN1O60890 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
OPHN1O60890 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.14■□□□□ 0.17
OPHN1O60890 KRT8P12-202ENST00000472924 1397 ntBASIC16.14■□□□□ 0.17
OPHN1O60890 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.14■□□□□ 0.17
OPHN1O60890 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.14■□□□□ 0.17
OPHN1O60890 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.14■□□□□ 0.17
OPHN1O60890 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 AL607033.1-201ENST00000623900 1599 ntBASIC16.14■□□□□ 0.17
OPHN1O60890 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
OPHN1O60890 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
OPHN1O60890 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.14■□□□□ 0.17
OPHN1O60890 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
OPHN1O60890 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.14■□□□□ 0.17
OPHN1O60890 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
OPHN1O60890 AC112492.5-201ENST00000421897 457 ntBASIC16.14■□□□□ 0.17
OPHN1O60890 HIST3H2BA-201ENST00000436555 524 ntBASIC16.14■□□□□ 0.17
OPHN1O60890 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.14■□□□□ 0.17
OPHN1O60890 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.14■□□□□ 0.17
OPHN1O60890 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.14■□□□□ 0.17
OPHN1O60890 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.14■□□□□ 0.17
OPHN1O60890 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.14■□□□□ 0.17
OPHN1O60890 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
OPHN1O60890 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.14■□□□□ 0.17
OPHN1O60890 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
OPHN1O60890 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
OPHN1O60890 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.14■□□□□ 0.17
OPHN1O60890 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.14■□□□□ 0.17
OPHN1O60890 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPHN1O60890 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
OPHN1O60890 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
OPHN1O60890 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
OPHN1O60890 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.13■□□□□ 0.17
OPHN1O60890 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.13■□□□□ 0.17
OPHN1O60890 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 C18orf15-201ENST00000623680 2534 ntBASIC16.13■□□□□ 0.17
OPHN1O60890 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 FAM45BP-202ENST00000592932 1624 ntBASIC16.13■□□□□ 0.17
OPHN1O60890 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.13■□□□□ 0.17
OPHN1O60890 AC079776.1-201ENST00000401540 1152 ntBASIC16.13■□□□□ 0.17
OPHN1O60890 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
OPHN1O60890 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.13■□□□□ 0.17
OPHN1O60890 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.13■□□□□ 0.17
OPHN1O60890 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.13■□□□□ 0.17
OPHN1O60890 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.13■□□□□ 0.17
OPHN1O60890 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.13■□□□□ 0.17
OPHN1O60890 AC007431.3-201ENST00000623221 587 ntBASIC16.13■□□□□ 0.17
OPHN1O60890 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.13■□□□□ 0.17
OPHN1O60890 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
OPHN1O60890 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms