Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.79□□□□□ -0.2
ZIC3O60481 AC025279.2-201ENST00000569730 653 ntBASIC13.79□□□□□ -0.2
ZIC3O60481 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ZIC3O60481 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.79□□□□□ -0.2
ZIC3O60481 AC244669.2-201ENST00000612320 853 ntBASIC13.79□□□□□ -0.2
ZIC3O60481 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ZIC3O60481 MIR6775-201ENST00000617557 69 ntBASIC13.79□□□□□ -0.2
ZIC3O60481 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ZIC3O60481 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.79□□□□□ -0.2
ZIC3O60481 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.79□□□□□ -0.2
ZIC3O60481 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ZIC3O60481 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ZIC3O60481 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
ZIC3O60481 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
ZIC3O60481 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.79□□□□□ -0.2
ZIC3O60481 LRRC59-203ENST00000576448 1531 ntBASIC13.79□□□□□ -0.2
ZIC3O60481 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.79□□□□□ -0.2
ZIC3O60481 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC3O60481 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.78□□□□□ -0.2
ZIC3O60481 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
ZIC3O60481 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
ZIC3O60481 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ZIC3O60481 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.78□□□□□ -0.2
ZIC3O60481 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
ZIC3O60481 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ZIC3O60481 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 AC006486.2-201ENST00000624246 2199 ntBASIC13.78□□□□□ -0.2
ZIC3O60481 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
ZIC3O60481 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
ZIC3O60481 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 EIF3FP3-201ENST00000434851 1086 ntBASIC13.78□□□□□ -0.2
ZIC3O60481 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
ZIC3O60481 AC234783.1-201ENST00000441761 496 ntBASIC13.78□□□□□ -0.2
ZIC3O60481 ATP5G2P4-201ENST00000442175 420 ntBASIC13.78□□□□□ -0.2
ZIC3O60481 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
ZIC3O60481 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
ZIC3O60481 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.78□□□□□ -0.2
ZIC3O60481 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.78□□□□□ -0.2
ZIC3O60481 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.78□□□□□ -0.2
ZIC3O60481 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.78□□□□□ -0.2
ZIC3O60481 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.78□□□□□ -0.2
ZIC3O60481 SNX29P1-201ENST00000548357 1007 ntBASIC13.78□□□□□ -0.2
ZIC3O60481 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.78□□□□□ -0.2
ZIC3O60481 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.78□□□□□ -0.2
ZIC3O60481 DUX4L47-201ENST00000566374 394 ntBASIC13.78□□□□□ -0.2
ZIC3O60481 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.78□□□□□ -0.2
ZIC3O60481 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.78□□□□□ -0.2
ZIC3O60481 AC017083.2-201ENST00000608069 979 ntBASIC13.78□□□□□ -0.2
ZIC3O60481 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.78□□□□□ -0.2
ZIC3O60481 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.78□□□□□ -0.2
ZIC3O60481 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.78□□□□□ -0.2
ZIC3O60481 WASH3P-207ENST00000560956 1394 ntBASIC13.78□□□□□ -0.2
ZIC3O60481 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.78□□□□□ -0.2
ZIC3O60481 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.78□□□□□ -0.2
ZIC3O60481 AC126177.1-201ENST00000547829 2218 ntBASIC13.78□□□□□ -0.2
ZIC3O60481 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZIC3O60481 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZIC3O60481 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZIC3O60481 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
ZIC3O60481 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZIC3O60481 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.77□□□□□ -0.2
ZIC3O60481 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZIC3O60481 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZIC3O60481 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZIC3O60481 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
ZIC3O60481 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC3O60481 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC3O60481 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC3O60481 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.77□□□□□ -0.21
ZIC3O60481 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC3O60481 ANKRD19P-201ENST00000338192 862 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms