Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
UPK1AO00322 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.6□□□□□ -0.07
UPK1AO00322 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.6□□□□□ -0.07
UPK1AO00322 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
UPK1AO00322 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.6□□□□□ -0.07
UPK1AO00322 TOMM22P5-201ENST00000416399 439 ntBASIC14.6□□□□□ -0.07
UPK1AO00322 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.6□□□□□ -0.07
UPK1AO00322 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.6□□□□□ -0.07
UPK1AO00322 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.6□□□□□ -0.07
UPK1AO00322 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.6□□□□□ -0.07
UPK1AO00322 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.6□□□□□ -0.07
UPK1AO00322 AC009407.1-201ENST00000568958 598 ntBASIC14.6□□□□□ -0.07
UPK1AO00322 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.6□□□□□ -0.07
UPK1AO00322 AC015910.1-201ENST00000579400 975 ntBASIC14.6□□□□□ -0.07
UPK1AO00322 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.6□□□□□ -0.07
UPK1AO00322 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.6□□□□□ -0.07
UPK1AO00322 AL390955.2-201ENST00000603032 514 ntBASIC14.6□□□□□ -0.07
UPK1AO00322 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.6□□□□□ -0.07
UPK1AO00322 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
UPK1AO00322 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.6□□□□□ -0.07
UPK1AO00322 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
UPK1AO00322 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.6□□□□□ -0.07
UPK1AO00322 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 LINC01230-201ENST00000625222 3017 ntBASIC14.6□□□□□ -0.07
UPK1AO00322 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.6□□□□□ -0.07
UPK1AO00322 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
UPK1AO00322 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1AO00322 WASH3P-207ENST00000560956 1394 ntBASIC14.6□□□□□ -0.07
UPK1AO00322 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.59□□□□□ -0.07
UPK1AO00322 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
UPK1AO00322 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.59□□□□□ -0.07
UPK1AO00322 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
UPK1AO00322 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.59□□□□□ -0.07
UPK1AO00322 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
UPK1AO00322 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 AL928921.2-201ENST00000641325 2442 ntBASIC14.59□□□□□ -0.07
UPK1AO00322 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 RPL5P21-201ENST00000404620 815 ntBASIC14.59□□□□□ -0.07
UPK1AO00322 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
UPK1AO00322 PMS2P2-201ENST00000425039 1128 ntBASIC14.59□□□□□ -0.07
UPK1AO00322 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.59□□□□□ -0.07
UPK1AO00322 AC114501.2-201ENST00000439631 535 ntBASIC14.59□□□□□ -0.07
UPK1AO00322 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.59□□□□□ -0.07
UPK1AO00322 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.59□□□□□ -0.07
UPK1AO00322 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.59□□□□□ -0.07
UPK1AO00322 AC004890.2-204ENST00000481968 304 ntBASIC14.59□□□□□ -0.07
UPK1AO00322 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
UPK1AO00322 RFPL4AP1-201ENST00000530883 850 ntBASIC14.59□□□□□ -0.07
UPK1AO00322 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.59□□□□□ -0.07
UPK1AO00322 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
UPK1AO00322 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.59□□□□□ -0.07
UPK1AO00322 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.59□□□□□ -0.07
UPK1AO00322 AC004461.2-201ENST00000629517 803 ntBASIC14.59□□□□□ -0.07
UPK1AO00322 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
UPK1AO00322 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.59□□□□□ -0.07
UPK1AO00322 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
UPK1AO00322 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1AO00322 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.59□□□□□ -0.07
UPK1AO00322 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
UPK1AO00322 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
UPK1AO00322 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms