Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC012508.2-201ENST00000567613 1472 ntBASIC15.12■□□□□ 0.01
CDC7O00311 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.12■□□□□ 0.01
CDC7O00311 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.12■□□□□ 0.01
CDC7O00311 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CDC7O00311 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CDC7O00311 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDC7O00311 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CDC7O00311 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CDC7O00311 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDC7O00311 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.12■□□□□ 0.01
CDC7O00311 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC7O00311 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC7O00311 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC7O00311 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDC7O00311 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CDC7O00311 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC7O00311 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CDC7O00311 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.11■□□□□ 0.01
CDC7O00311 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDC7O00311 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.11■□□□□ 0.01
CDC7O00311 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC7O00311 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.11■□□□□ 0.01
CDC7O00311 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC7O00311 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC7O00311 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC7O00311 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC7O00311 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDC7O00311 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC7O00311 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.11■□□□□ 0.01
CDC7O00311 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
CDC7O00311 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 LINC00552-201ENST00000625151 2579 ntBASIC15.11■□□□□ 0.01
CDC7O00311 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDC7O00311 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC7O00311 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.11■□□□□ 0.01
CDC7O00311 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDC7O00311 PCDHA3-202ENST00000532566 4594 ntBASIC15.1■□□□□ 0.01
CDC7O00311 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
CDC7O00311 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.1■□□□□ 0.01
CDC7O00311 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
CDC7O00311 CICP14-201ENST00000629111 2732 ntBASIC15.1■□□□□ 0.01
CDC7O00311 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CDC7O00311 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC7O00311 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC7O00311 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CDC7O00311 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms