Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 AL161670.2-201ENST00000557650 1227 ntBASIC14.98□□□□□ -0.01
C4orf47A7E2U8 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 ZACNP1-201ENST00000612259 710 ntBASIC14.98□□□□□ -0.01
C4orf47A7E2U8 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 KRT8P29-201ENST00000420409 1371 ntBASIC14.98□□□□□ -0.01
C4orf47A7E2U8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
C4orf47A7E2U8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 DPM3-202ENST00000368399 517 ntBASIC14.97□□□□□ -0.01
C4orf47A7E2U8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 HIST2H2BB-201ENST00000449108 381 ntBASIC14.97□□□□□ -0.01
C4orf47A7E2U8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 AC100850.1-201ENST00000506768 649 ntBASIC14.97□□□□□ -0.01
C4orf47A7E2U8 AC106794.1-201ENST00000506935 792 ntBASIC14.97□□□□□ -0.01
C4orf47A7E2U8 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 AF254983.2-201ENST00000612331 135 ntBASIC14.97□□□□□ -0.01
C4orf47A7E2U8 AL023803.2-201ENST00000620080 638 ntBASIC14.97□□□□□ -0.01
C4orf47A7E2U8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 AL139384.1-201ENST00000612143 3047 ntBASIC14.97□□□□□ -0.01
C4orf47A7E2U8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
C4orf47A7E2U8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
C4orf47A7E2U8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
C4orf47A7E2U8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
C4orf47A7E2U8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.96□□□□□ -0.01
C4orf47A7E2U8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
C4orf47A7E2U8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms