Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.93■□□□□ 0.62
LAMB4A4D0S4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.93■□□□□ 0.62
LAMB4A4D0S4 AC016629.1-201ENST00000596579 586 ntBASIC18.93■□□□□ 0.62
LAMB4A4D0S4 AC133540.1-201ENST00000620845 1019 ntBASIC18.93■□□□□ 0.62
LAMB4A4D0S4 YRDCP1-201ENST00000621419 643 ntBASIC18.93■□□□□ 0.62
LAMB4A4D0S4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LAMB4A4D0S4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LAMB4A4D0S4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LAMB4A4D0S4 AC013726.1-201ENST00000563747 2285 ntBASIC18.92■□□□□ 0.62
LAMB4A4D0S4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 AL353637.1-201ENST00000451571 732 ntBASIC18.92■□□□□ 0.62
LAMB4A4D0S4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 TMEM198B-204ENST00000484016 896 ntBASIC18.92■□□□□ 0.62
LAMB4A4D0S4 AC134698.3-201ENST00000523880 214 ntBASIC18.92■□□□□ 0.62
LAMB4A4D0S4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 SNORD3B-2-202ENST00000571722 791 ntBASIC18.92■□□□□ 0.62
LAMB4A4D0S4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 ACE3P-201ENST00000423435 1973 ntBASIC18.92■□□□□ 0.62
LAMB4A4D0S4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LAMB4A4D0S4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.91■□□□□ 0.62
LAMB4A4D0S4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 EEF1DP6-201ENST00000449232 372 ntBASIC18.91■□□□□ 0.62
LAMB4A4D0S4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 RNA5SP359-201ENST00000364838 113 ntBASIC18.91■□□□□ 0.62
LAMB4A4D0S4 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.91■□□□□ 0.62
LAMB4A4D0S4 AC234782.1-201ENST00000451950 919 ntBASIC18.91■□□□□ 0.62
LAMB4A4D0S4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 AC027237.1-201ENST00000560942 655 ntBASIC18.91■□□□□ 0.62
LAMB4A4D0S4 AL133499.1-201ENST00000596207 608 ntBASIC18.91■□□□□ 0.62
LAMB4A4D0S4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LAMB4A4D0S4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 AC092506.1-202ENST00000401022 528 ntBASIC18.9■□□□□ 0.62
LAMB4A4D0S4 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.9■□□□□ 0.62
LAMB4A4D0S4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 MIR4754-201ENST00000582477 89 ntBASIC18.9■□□□□ 0.62
LAMB4A4D0S4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.9■□□□□ 0.62
LAMB4A4D0S4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.9■□□□□ 0.62
LAMB4A4D0S4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms