Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 AC009955.4-201ENST00000597192 544 ntBASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 AC010141.1-201ENST00000411585 623 ntBASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 AC138649.2-201ENST00000615886 705 ntBASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 AC022748.3-201ENST00000621828 275 ntBASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 REXO1L2P-201ENST00000425429 2069 ntBASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC144AA2RUR9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 AC020910.5-201ENST00000623668 1865 ntBASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 IGHJ2P-201ENST00000454480 60 ntBASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC144AA2RUR9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC144AA2RUR9 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC144AA2RUR9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 AC023090.2-201ENST00000625182 2110 ntBASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 AC016700.1-201ENST00000429424 312 ntBASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 NKAIN1P1-201ENST00000435754 582 ntBASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 REEP1-202ENST00000453231 940 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 NAT9-222ENST00000583476 583 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC144AA2RUR9 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms