Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC097359.2-201ENST00000604992 2389 ntBASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 FAM58DP-201ENST00000428076 619 ntBASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 RN7SL828P-201ENST00000607615 303 ntBASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC003101.2-201ENST00000612557 442 ntBASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC007967.4-201ENST00000614700 386 ntBASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 AL513210.1-201ENST00000629608 234 ntBASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV6-7A0A0A0MS04 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC011474.4-201ENST00000623523 2076 ntBASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 CICP20-201ENST00000443330 2801 ntBASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 MIR574-201ENST00000385209 96 ntBASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 AL627223.1-201ENST00000416693 442 ntBASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC005829.1-201ENST00000570002 483 ntBASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms