Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 SDHAP3-202ENST00000515467 728 ntBASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 AL158211.3-201ENST00000607385 239 ntBASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 AC074044.1-201ENST00000609673 707 ntBASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 Z97205.2-201ENST00000564697 1639 ntBASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 RDX-218ENST00000544551 4117 ntTSL 2 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 RPL5P21-201ENST00000404620 815 ntBASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 TIMM17BP1-201ENST00000545713 516 ntBASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 AC084364.1-201ENST00000551967 1556 ntBASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 AC010336.2-201ENST00000564226 506 ntBASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 AC126365.1-201ENST00000578585 1514 ntBASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms