Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 AC004449.1-201ENST00000564240 433 ntBASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RHBDD3Q9Y3P4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 RPL37AP1-201ENST00000412502 279 ntBASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 AL080243.2-201ENST00000418783 582 ntBASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 CNN2P2-201ENST00000443536 909 ntBASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 CNN2P3-201ENST00000450201 906 ntBASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 AP001160.2-201ENST00000596071 487 ntBASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 AL136317.3-201ENST00000618497 906 ntBASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 TUBB3P1-201ENST00000405796 1332 ntBASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RHBDD3Q9Y3P4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 AC005912.2-201ENST00000619492 2400 ntBASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RHBDD3Q9Y3P4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms